Yunne-Jai Shin

Informations


Institute : IRD

GRADE : DR2

Location : MONTPELLIER




Departments : Modeling

Publications

2017

Bundy, A., et al. "Strong fisheries management and governance positively impact ecosystem status." Fish Fish. 18.3 (2017): 412–439.
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Fu, C., et al. "Spatial and temporal dynamics of predator-prey species interactions off western Canada." ICES J Mar Sci (2017).
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Oliveros-Ramos, R., et al. "A sequential approach to calibrate ecosystem models with multiple time series data." Progress in Oceanography. 151 (2017): 227–244.
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Reed, J., et al. "Ecosystem indicators—accounting for variability in species’ trophic levels." ICES J Mar Sci. 74.1 (2017): 158–169.
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2016

Coll, M., et al. "Ecological indicators to capture the effects of fishing on biodiversity and conservation status of marine ecosystems." Ecological Indicators. 60 (2016): 947–962.
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Grüss, A., et al. "Management strategy evaluation using the individual-based, multispecies modeling approach OSMOSE." Ecological Modelling. 340 (2016): 86–105.
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Grüss, A., et al. "Estimating natural mortality rates and simulating fishing scenarios for Gulf of Mexico red grouper (Epinephelus morio) using the ecosystem model OSMOSE-WFS." Journal of Marine Systems. 154, Part B (2016): 264–279.
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Halouani, G., et al. "Modelling food web structure using an end-to-end approach in the coastal ecosystem of the Gulf of Gabes (Tunisia)." Ecological Modelling. 339 (2016): 45–57.
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Kirkman, S. P., et al. "Spatial characterisation of the Benguela ecosystem for ecosystem-based management." Afr. J. Mar. Sci.. 38.1 (2016): 7–22.
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2015

FU, C., et al. "Relationships among fisheries exploitation, environmental conditions, and ecological indicators across a series of marine ecosystems." Journal of Marine Systems. 148 (2015): 101–111.
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Grüss, A., et al. "Evaluation of the trophic structure of the West Florida Shelf in the 2000s using the ecosystem model OSMOSE." Journal of Marine Systems. 144 (2015): 30–47.
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KLEISNER, K. M., et al. "Evaluating changes in marine communities that provide ecosystem services through comparative assessments of community indicators." Ecosystem Services. 16 (2015): 413–429.
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Smith, M. D., et al. "Ecosystem modelling in the southern Benguela: comparisons of Atlantis, Ecopath with Ecosim, and OSMOSE under fishing scenarios." African Journal of Marine Science. 37.1 (2015): 65–78.
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2014

Shannon, L., et al. "Trophic level-based indicators to track fishing impacts across marine ecosystems." Mar Ecol Prog Ser. 512 (2014): 115–140.
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Travers-Trolet, M., Y. - J. Shin, and J. Field. "An end-to-end coupled model ROMS-N 2 P 2 Z 2 D 2 -OSMOSE of the southern Benguela foodweb: parameterisation, calibration and pattern-oriented validation." African Journal of Marine Science. 36.1 (2014): 11–29.
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Travers-Trolet, M., et al. "Combined fishing and climate forcing in the southern Benguela upwelling ecosystem : an end-to-end modelling approach reveals dampened effects." Plos One. 9.4 (2014).
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2013

Fu, C. H., et al. "An ecosystem modelling framework for incorporating climate regime shifts into fisheries management." Progress in Oceanography. 115 (2013): 53–64.
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Shannon, L., and Y. - J. Shin. "Low Trophic Level Project: Southern Benguela upwelling ecosystem." Marine Stewardship Council Scienc.1 (2013): 54–110.
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2012

Bundy, A., et al. "Global assessments of the status of marine exploited ecosystems and their management : what more is needed ?" Current Opinion in Environmental Sustainability. 4.3 (2012): 292–299.
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Gasche, L., et al. "Global assessment of the fishing impacts on the Southern Benguela ecosystem using an EcoTroph modelling approach." Journal of Marine Systems. 90.1 (2012): 1–12.
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Shin, Y. - J., et al. "Global in scope and regionally rich: an IndiSeas workshop helps shape the future of marine ecosystem indicators." Reviews in Fish Biology and Fisheries. 22.3 (2012): 835–845.
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2011

Smith, A. D. M., et al. "Impacts of Fishing Low-Trophic Level Species on Marine Ecosystems." Science. 333.6046 (2011): 1147–1150.
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2010

Blanchard, J. L., et al. "Trend analysis of indicators : a comparison of recent changes in the status of marine ecosystems around the world." Ices Journal of Marine Science. 67.4 (2010): 732–744.
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Bundy, A., et al. "The good(ish), the bad, and the ugly : a tripartite classification of ecosystem trends." Ices Journal of Marine Science. 67 (2010): 745–768.
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Coll, M., et al. "Ranking the ecological relative status of exploited marine ecosystems." ICES Journal of Marine Science. 67.4 (2010): 769–786.
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Diaz, E., et al. "Using indicators for evaluating, comparing, and communicating the ecological status of exploited marine ecosystems. 2. Setting the scene." Ices Journal of Marine Science. 67 (2010): 692–716.
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Duboz, R., et al. "Application of an evolutionary algorithm to the inverse parameter estimation of an individual-based model." Ecological Modelling. 221 (2010): 840–849.
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Link, J. S., et al. "Relating marine ecosystem indicators to fishing and environmental drivers : an elucidation of contrasting responses." Ices Journal of Marine Science. 67 (2010): 787–795.
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Rose, K., et al. "End-To-End Models for the Analysis of Marine Ecosystems: Challenges, Issues, and Next Steps." Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science. 2.1 (2010): 115–130.
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Shannon, L. J., et al. "Comparing data-based indicators across upwelling and comparable systems for communicating ecosystem states and trends." ICES J. Mar. Sci.. 67.4 (2010): 807–832.
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Shin, Y. - J., and L. J. Shannon. "Using indicators for evaluating, comparing, and communicating the ecological status of exploited marine ecosystems. 1. The IndiSeas project." Ices Journal of Marine Science. 67 (2010): 686–691.
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Shin, Y. - J., et al. "Can simple be useful and reliable? Using ecological indicators to represent and compare the states of marine ecosystems." Ices Journal of Marine Science. 67.4 (2010): 717–731.
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Shin, Y. - J., et al. "Using indicators for evaluating, comparing, and communicating the ecological status of exploited marine ecosystems. 2. Setting the scene." Ices Journal of Marine Science. 67.4 (2010): 692–716.
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Shin, Y. - J., M. Travers, and O. Maury. "Coupling low and high trophic levels models : towards a pathways-orientated approach for end-to-end models." Progress in Oceanography. 84 (2010): 105–112.
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Travers, M., and Y. - J. \textbackslashtextbackslash¨ie Shin. "Spatio-temporal variability in fish-induced predation mortality on plankton : a simulation approach using a coupled trophic model of the Benguela ecosystem." Progress in Oceanography. 84 (2010): 118–120.
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Travers, M., et al. "Changes in food web structure under scenarios of overfishing in the southern Benguela : comparison of the Ecosim and OSMOSE modelling approaches." Journal of Marine Systems. 79 (2010): 101–111.
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2009

Marzloff, M., et al. "Trophic structure of the Peruvian marine ecosystem in 2000-2006 : insights on the effects of management scenarios for the hake fishery using the IBM trophic model Osmose." J. Mar. Syst.. 75 (2009): 290–304.
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Mullon, C., Y. - J. Shin, and P. Cury. "Neats : a Network Economics Approach to Trophic Systems." Ecol. Model. (2009): 13-p.
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Travers, M., et al. "Two-way coupling versus one-way forcing of plankton and fish models to predict ecosystem changes in the Benguela." Ecological Modelling. 220.21 (2009): 3089–3099.
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Yemane, D., Y. - J. Shin, and J. G. Field. "Exploring the effect of Marine Protected Areas on the dynamics of fish communities in the southern Benguela : an individual-based modelling approach." Ices Journal of Marine Science. 66.2 (2009): 378–387.
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MARBEC MARine Biodiversity, Exploitation and Conservation, is a research unit which includes the staff of 4 organizations: IRD, IFREMER, UM and CNRS. Its objective is the study of marine biodiversity in lagoon coastal and offshore ecosystems, at different integration levels, molecular, individual, population and community aspects and the way humans use this biodiversity.