2020 |
Bouyoucos, I. A., et al. "Home range of newborn blacktip reef sharks (Carcharhinus melanopterus), as estimated using mark-recapture and acoustic telemetry." Coral Reefs (2020).
Résumé: Sharks play important functional roles in coral reef ecosystems. Studying reef shark populations' spatial ecology also contributes important data for effective conservation planning. The purpose of this study was to define the home range of neonatal blacktip reef sharks (Carcharhinus melanopterus) around Moorea, French Polynesia, and compare estimates using both mark-recapture surveys and active acoustic telemetry. Mark-recapture surveys produced a minimum convex polygon (MCP) of 0.07 km(2) that was significantly larger than the MCP derived from acoustic telemetry (0.02 km(2)). Acoustic telemetry produced 50 and 95% kernel utilization densities that were smaller (0.02 km(2)) and larger (0.14 km(2)) than home range estimates from mark-recapture surveys, respectively. Home range estimates from this study are the smallest that have been documented for neonatal blacktip reef sharks, possibly owing to the study sites' proximity to deep channels. Mark-recapture and active acoustic telemetry are complementary approaches worthy of consideration where passive telemetry is impractical.
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Rouyer, T., et al. "Tagging Atlantic bluefin tuna from a Mediterranean spawning ground using a purse seiner." Fish Res.. 226 (2020): 105522.
Résumé: Atlantic bluefin tuna, Thunnus thynnus, is as an emblematic and commercially valuable large pelagic species. In the past ten years, the purse seine fishery in the Mediterranean represents more than 50 % of the catch. Nowadays, purse seines target large fish and operate during the spawning season in the spawning grounds. Electronic tagging has shed a considerable amount of light on the ecology and behaviour of bluefin tuna over the past twenty years. However, such technique has rarely been applied on large bluefin tunas caught by the Mediterranean purse seine fishery despite its major importance. The logistical constraints related to this specific fishery, combined with the timing of migration of the fish and the requirements related to the handling of big fish have made adequate tagging from purse seines complex. Here we detail such an operation, designed to bridge the knowledge gap on the migratory behaviour of tunas targeted by the purse seine fishery. Three large bluefin tunas from the same school were tagged during the fishing operation of a French purse seine, resulting in a different migration pattern than previous deployments. The fish were tagged onboard in less than 2 min and efficiently, avoiding any subsequent mortality. These results contrast with those from tagging operations carried out in the Northwest Mediterranean, which underlies the importance of tagging operations from purse seines to obtain unbiased description of the movements of the eastern Atlantic bluefin tuna stock in the context of its management.
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Travassos Tolotti, M., et al. "Association dynamics of tuna and purse seine bycatch species with drifting fish aggregating devices (FADs) in the tropical eastern Atlantic Ocean." Fish Res.. 226 (2020): 105521.
Résumé: Several pelagic fish species are known to regularly associate with floating objects in the open ocean, including commercially valuable species. The tuna purse seine industry takes advantage of this associative behavior and has been increasingly deploying free-drifting man-made floating objects, also known as fish aggregating devices (FADs). Using passive acoustic telemetry, this study describes the associative dynamics of the main targeted tropical tuna species (Thunnus albacores, T. obelus and Katsuwonus pelamis), as well as three major bycatch species, silky shark (Carcharhinus falciformis), rainbow runner (Elagatis bipinmdata) and oceanic triggerfish (Canthidermis maculata). Short-term excursions away from the FADs were frequently performed by all tuna species as well by silky sharks. These excursions were characterized by a marked diel pattern, mainly occurring during nighttime. Rainbow runners and oceanic triggerfish were much more present at the FADs and rarely performed excursions. Average continuous residence times (CRTs) ranged from 6 days, for silky shark, up to 25 days for bigeye tuna. Similar to silky shark, average CRTs for skipjack tuna and oceanic triggerfish were less than 10 days. For yellowfin tuna and rainbow runner, CRTs averaged 19 and 16 days, respectively. Bigeye and yellowfin tuna remained associated to a single drifting FAD for a record of 55 days and 607 km traveled.
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2019 |
Bonnin, L., et al. "Repeated long-range migrations of adult males in a common Indo-Pacific reef shark." Coral Reefs (2019).
Résumé: The grey reef shark, Carcharhinus amblyrhynchos, is one of the most abundant coral reef sharks throughout the Indo-Pacific. However, this species has been critically impacted across its range, with well-documented population declines of > 90% attributed to human activities. A key knowledge gap in the successful implementation of grey reef shark conservation plans is the understanding of large-scale movement patterns, along with the associated biological and ecological drivers. To address this shortfall, we acoustically monitored 147 adult and juvenile grey reef sharks of all sexes for more than 2 yr across the New Caledonian archipelago, West Pacific. Here, we document multiple adult males undertaking return journeys of up to nearly 700 km in consecutive years. This constitutes the first evidence of repeated long-range migrations for this species. Although only a limited number of adult males were definitively tracked undertaking migrations, similar timing in changes in the detection patterns of a further 13 animals, mostly adult males, suggests this behavior may be more common than previously thought. The paucity of evidence for juvenile migrations and timing of adult movements suggest that mating is the motivation behind these migrations. Our results have important implications for management, given the potential of mature individuals to recurrently travel outside managed or protected areas. Future management of this species clearly needs to consider the importance of large-scale migratory behaviors when developing management plans.
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Carpentier, A. S., et al. "Preliminary insights into the population characteristics and distribution of reef (Mobula alfredi) and oceanic (M. birostris) manta rays in French Polynesia." Coral Reefs. 38.6 (2019): 1197–1210.
Résumé: In French Polynesia, both currently recognized manta ray species, Mobula alfredi and M. birostris, are observed. Despite being an important cultural asset and generating significant economic benefits through manta ray watching tourism, published data on the ecology and threats to these species in the region are scarce. Based on an 18-year dataset of sighting records collected by citizen scientists and during two scientific expeditions, this study provides the first insights into the population characteristics and regional distribution of the two manta ray species in French Polynesia. A total of 1347 manta ray photographs (1337 for M. alfredi and 10 for M. birostris) were examined for the period January 2001-December 2017, with photo-identification techniques leading to the successful identification of 317 individual M. alfredi and 10 individual M. birostris throughout the Society, Tuamotu and Marquesas Islands. We provide the first confirmation of sympatric distribution of both species in the Society Islands. Our results highlight strong and long-term site fidelity of M. alfredi individuals to certain aggregation sites (> 9 years for 16 individuals) and reveal some degree of connectivity between populations, with 10 individuals recorded moving between islands located up to 50 km apart. Analysis of photographs of individuals bearing sub-lethal injuries (n = 68) suggests that M. alfredi are more likely to be injured at inhabited islands (Maupiti or Bora Bora; 75% of all injured individuals) than at uninhabited islands, with 75% of injuries related to boat propeller strikes and fishing gear entanglements. Our findings emphasize the need for further research to allow for a comprehensive evaluation of population structure, size and threats to manta rays in this region.
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Cruaud, P., et al. "Ecophysiological differences between vesicomyid species and metabolic capabilities of their symbionts influence distribution patterns of the deep-sea clams." Mar. Ecol.-Evol. Persp.. 40.3 (2019): e12541.
Résumé: This study provides an analysis of vesicomyid bivalve-symbiont community distribution across cold seep and hydrothermal vent areas in the Guaymas Basin (Gulf of California, Mexico). Using a combination of morphological and molecular approaches including fluorescent in situ hybridization (FISH), and electronic microscopy observations, vesicomyid clam species and their associated symbionts were characterized and results were analyzed in light of geochemical conditions and other on-site observations. A greater diversity of vesicomyids was found at cold seep areas, where three different species were present (Phreagena soyoae [syn. kilmeri], Archivesica gigas, and Calyptogena pacifica). In contrast, A. gigas was the only species sampled across the hydrothermal vent area. The same haplotype of A. gigas was found in both hydrothermal vent and cold seep areas, highlighting possible contemporary exchanges among neighboring vents and seeps. In either ecosystem, molecular characterization of the symbionts confirmed the specificity between symbionts and hosts and supported the hypothesis of a predominantly vertical transmission. In addition, patterns of clams could reflect potential niche preferences for each species. The occurrence of numerous traces of vesicomyid movements on sediments in the sites colonized by A. gigas seemed to indicate that this species might have a better ability to move. Furthermore, variation in gill sulfur content could reveal a higher plasticity and sulfur storage capacity in A. gigas. Thus, the distribution of vesicomyid species across the chemosynthetic areas of the Guaymas Basin could be explained by differences in biological traits of the vesicomyid species that would allow A. gigas to more easily exploit transient and punctual sources of available sulfide than P. soyoae.
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Queiroz, N., et al. "Global spatial risk assessment of sharks under the footprint of fisheries." Nature. 572.7770 (2019): 461–+.
Résumé: Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fleets, that 24% of the mean monthly space used by sharks falls under the footprint of pelagic longline fisheries. Space-use hotspots of commercially valuable sharks and of internationally protected species had the highest overlap with longlines (up to 76% and 64%, respectively), and were also associated with significant increases in fishing effort. We conclude that pelagic sharks have limited spatial refuge from current levels of fishing effort in marine areas beyond national jurisdictions (the high seas). Our results demonstrate an urgent need for conservation and management measures at high-seas hotspots of shark space use, and highlight the potential of simultaneous satellite surveillance of megafauna and fishers as a tool for near-real-time, dynamic management.
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Sardenne, F., et al. "Seasonal habitat and length influence on the trophic niche of co-occurring tropical tunas in the eastern Atlantic Ocean." Can. J. Fish. Aquat. Sci.. 76.1 (2019): 69–80.
Résumé: In the Gulf of Guinea, bigeye tuna (Thunnus obesus; BET) and yellowfin tuna (Thunnus albacares; YFT) are an important part of commercial fisheries and play a prominent ecological role as top predators. Using fatty acid profiles and carbon and nitrogen stable isotopes, we examined their trophic niche partitioning in this understudied region. Trophic niche overlap was high (> 70%), similar to percentages in other ocean basins. BET occupied a higher trophic position than YFT and fed on deeper prey (high delta N-15 values and high proportions of monounsaturated fatty acids). The trophic position of YFT decreased slightly in the last 15 years (delta N-15 values decreased by similar to 0.5 parts per thousand), suggesting a change in epipelagic communities, as observed in the eastern Pacific Ocean. Ontogenic changes were limited to BET. For both species, the dietary proportion of the diatom marker 20:5(n-3) increased in the seasonal upwelling area, highlighting the influence of seasonal habitat on the diet of tuna. The relatively lipid-rich muscle (similar to 6% dry mass) of Atlantic tropical tuna suggests a richer diet in this region than that of Indian Ocean tropical tuna and (or) differences in energy allocation strategies.
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2016 |
Pirog, A., et al. "Isolation and characterization of eight microsatellite loci from Galeocerdo cuvier (tiger shark) and cross-amplification in Carcharhinus leucas, Carcharhinus brevipinna, Carcharhinus plumbeus and Sphyrna lewini." PeerJ. 4 (2016): e2041.
Résumé: The tiger shark Galeocerdo cuvier (Carcharhinidae) is a large elasmobranch suspected to have, as other apex predators, a keystone function in marine ecosystems and is currently considered Near Threatened (Red list IUCN). Knowledge on its ecology, which is crucial to design proper conservation and management plans, is very scarce. Here we describe the isolation of eight polymorphic microsatellite loci using 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries. Their characteristics were tested on a population of tiger shark (n = 101) from Reunion Island (South-Western Indian Ocean). All loci were polymorphic with a number of alleles ranging from two to eight. No null alleles were detected and no linkage disequilibrium was detected after Bonferroni correction. Observed and expected heterozygosities ranged from 0.03 to 0.76 and from 0.03 to 0.77, respectively. No locus deviated from Hardy-Weinberg equilibrium and the global F-IS of the population was of 0.04(NS). Some of the eight loci developed here successfully cross-amplified in the bull shark Carcharhinus leucas (one locus), the spinner shark Carcharhinus brevi pi n n a (four loci), the sandbar shark Carcharhinus plumbeus (five loci) and the scalloped hammerhead shark Sphyrna lewini (two loci). We also designed primers to amplify and sequence a mitochondrial marker, the control region. We sequenced 862 bp and found a low genetic diversity, with four polymorphic sites, a haplotype diversity of 0.15 and a nucleotide diversity of 2 x 10(-4).
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2014 |
Fablet, R., A. Chaigneau, and S. Bertrand. "Multiscale analysis of geometric planar deformations : application to wild animal electronic tracking and satellite ocean observation data." Ieee Transactions on Geoscience and Remote Sensing. 52.6 (2014): 3627–3636.
Résumé: The development of animal tracking technologies (including GPS and ARGOS satellite systems) and the increasing resolution of remote-sensing observations call for tools extracting and describing the geometric patterns along a track or within an image over a wide range of spatial scales. Whereas shape analysis has largely been addressed over the last decades, the multiscale analysis of the geometry of opened planar curves has received little attention. We here show that classical multiscale techniques cannot properly address this issue and propose an original wavelet-based scheme. To highlight the generic nature of our multiscale wavelet technique, we report applications to two different observation data sets, namely, wild animal movement paths recorded by electronic tags and satellite observations of sea-surface geophysical fields.
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