2020

Ben Rais Lasram, F., et al. "An open-source framework to model present and future marine species distributions at local scale." Ecological Informatics. 59 (2020): 101130.
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Boulanger, E., et al. "Spatial graphs highlight how multi-generational dispersal shapes landscape genetic patterns." Ecography (2020).
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Cardiec, F., et al. "“Too Big To Ignore”: A feasibility analysis of detecting fishing events in Gabonese small-scale fisheries." Plos One. 15.6 (2020): e0234091.
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Coelho, R., et al. "Local indicators for global species: Pelagic sharks in the tropical northeast Atlantic, Cabo Verde islands region." Ecological Indicators. 110 (2020): 105942.
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Huang, J. - L., et al. "Importance of spatio-temporal connectivity to maintain species experiencing range shifts." Ecography (2020).
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Jaonalison, H., et al. "Predicting species richness and abundance of tropical post-larval fish using machine learning." Marine Ecology Progress Series. 645 (2020): 125–139.
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Jeliazkov, A., et al. "A global database for metacommunity ecology, integrating species, traits, environment and space." Sci. Data. 7.1 (2020): 6.
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Le Marchand, M., et al. "Climate change in the Bay of Biscay: Changes in spatial biodiversity patterns could be driven by the arrivals of southern species." Marine Ecology Progress Series. 647 (2020): 17–31.
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Lett, C., N. Barrier, and M. Bahlali. "Converging approaches for modeling the dispersal of propagules in air and sea." Ecol. Model.. 415 (2020): 108858.
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Mannocci, L., et al. "Geographical differences in habitat relationships of cetaceans across an ocean basin." Ecography (2020).
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Morato, T., et al. "Climate-induced changes in the suitable habitat of cold-water corals and commercially important deep-sea fishes in the North Atlantic." Glob. Change Biol. (2020).
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Ouisse, V., et al. "Swinging boat moorings: Spatial heterogeneous damage to eelgrass beds in a tidal ecosystem." Estuarine, Coastal and Shelf Science. 235 (2020): 106581.
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Pagès, R., et al. "Changes in rivers inputs during the last decades significantly impacted the biogeochemistry of the eastern Mediterranean basin: A modelling study." Prog. Oceanogr.. 181 (2020): 102242.
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Pete, R., et al. "A box-model of carrying capacity of the Thau lagoon in the context of ecological status regulations and sustainable shellfish cultures." Ecological Modelling. 426 (2020): 109049.
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Schickele, A., et al. "Modelling European small pelagic fish distribution: Methodological insights." Ecological Modelling. 416 (2020): 108902.
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Stephenson, F., et al. "Modelling the spatial distribution of cetaceans in New Zealand waters." Diversity and Distributions. 26.4 (2020): 495–516.
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Viblanc, V. A., et al. "Foster rather than biological parental telomere length predicts offspring survival and telomere length in king penguins." Mol. Ecol. (2020).
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2019

Ba, A., et al. "The potential impact of marine protected areas on the Senegalese sardinella fishery." Ocean Coastal Manage.. 169 (2019): 239–246.
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Bănaru, D., et al. "Implementation of an end-to-end model of the Gulf of Lions ecosystem (NW Mediterranean Sea). I. Parameterization, calibration and evaluation." Ecological Modelling. 401 (2019): 1–19.
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Benedetti, F., et al. "Climate change may have minor impact on zooplankton functional diversity in the Mediterranean Sea." Divers. Distrib.. 25.4 (2019): 568–581.
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Blanchard, F., C. Chaboud, and O. Thebaud. "Back to the future: A retrospective assessment of model-based scenarios for the management of the shrimp fishery in French Guiana facing global change." Nat. Resour. Model. (2019): e12232.
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Bryndum‐Buchholz, A., et al. "Twenty-first-century climate change impacts on marine animal biomass and ecosystem structure across ocean basins." Global Change Biology. 25.2 (2019): 459–472.
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Carvalho, P. G., et al. "Optimized fishing through periodically harvested closures." J. Appl. Ecol.. 56.8 (2019): 1927–1936.
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Chary, K., et al. "Modeling sea cage outputs for data-scarce areas: application to red drum (Sciaenops ocellatus) aquaculture in Mayotte, Indian Ocean." Aquacult Int (2019).
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Dalleau, M., et al. "Modeling the emergence of migratory corridors and foraging hot spots of the green sea turtle." Ecol. Evol. (2019).
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Diaz, F., et al. "Implementation of an end-to-end model of the Gulf of Lions ecosystem (NW Mediterranean Sea). II. Investigating the effects of high trophic levels on nutrients and plankton dynamics and associated feedbacks." Ecological Modelling. 405 (2019): 51–68.
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Donati, G. F. A., et al. "A process-based model supports an association between dispersal and the prevalence of species traits in tropical reef fish assemblages." Ecography (2019).
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Fu, C., et al. "Making ecological indicators management ready: Assessing the specificity, sensitivity, and threshold response of ecological indicators." Ecological Indicators. 105 (2019): 16–28.
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Gaboriau, T., et al. "Ecological constraints coupled with deep-time habitat dynamics predict the latitudinal diversity gradient in reef fishes." Proc. R. Soc. B-Biol. Sci.. 286.1911 (2019): 20191506.
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Grüss, A., et al. "Building bridges between global information systems on marine organisms and ecosystem models." Ecological Modelling. 398 (2019): 1–19.
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Henckel, L., et al. "On the relative importance of space and environment in farmland bird community assembly." PLoS One. 14.3 (2019): e0213360.
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Lembrechts, J. J., et al. "Comparing temperature data sources for use in species distribution models: From in-situ logging to remote sensing." Glob. Ecol. Biogeogr.. 28.11 (2019): 1578–1596.
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Lett, C., et al. "Modeling larval dispersal for the gilthead seabream in the northwestern Mediterranean Sea." Marine Environmental Research (2019): 104781.
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Lotze, H. K., et al. "Global ensemble projections reveal trophic amplification of ocean biomass declines with climate change." Pnas. 116.26 (2019): 12907–12912.
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Meddeb, M., et al. "A new type of plankton food web functioning in coastal waters revealed by coupling Monte Carlo Markov chain linear inverse method and ecological network analysis." Ecol. Indic.. 104 (2019): 67–85.
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Meynard, C. N., D. M. Kaplan, and B. Leroy. "Detecting outliers in species distribution data: Some caveats and clarifications on a virtual species study." J. Biogeogr.. 46.9 (2019): 2141–2144.
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Meynard, C. N., B. Leroy, and D. M. Kaplan. "Testing methods in species distribution modelling using virtual species: what have we learnt and what are we missing?" Ecography. 42.12 (2019): 2021–2036.
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Moullec, F., et al. "An End-to-End Model Reveals Losers and Winners in a Warming Mediterranean Sea." Front. Mar. Sci.. 6 (2019).
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Moullec, F., et al. "Capturing the big picture of Mediterranean marine biodiversity with an end-to-end model of climate and fishing impacts." Progress in Oceanography. 178 (2019): 102179.
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Pagès, R., et al. "Changes in rivers inputs during the last decades significantly impacted the biogeochemistry of the eastern Mediterranean basin: a modelling study." Progress in Oceanography (2019): 102242.
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Queiroz, N., et al. "Global spatial risk assessment of sharks under the footprint of fisheries." Nature. 572.7770 (2019): 461–+.
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Sadoul, B., et al. "Prediction of long-term variation in offspring metabolism due to BPA in eggs in rainbow trout using the DEB model." J. Sea Res.. 143 (2019): 222–230.
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Soissons, L. M., et al. "Sandification vs. muddification of tidal flats by benthic organisms: A flume study." Estuar. Coast. Shelf Sci.. 228 (2019): Unsp-106355.
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Spedicato, M. T., et al. "Spatial distribution of marine macro-litter on the seafloor in the northern Mediterranean Sea: the MEDITS initiative." Sci. Mar.. 83 (2019): 257–270.
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Virgili, A., et al. "Combining multiple visual surveys to model the habitat of deep-diving cetaceans at the basin scale." Global Ecology and Biogeography. 28.3 (2019): 300–314.
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2018

Ba, K., et al. "Long-term fishing impact on the Senegalese coastal demersal resources: diagnosing from stock assessment models." Aquat. Living Resour.. 31 (2018): 8.
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Batsleer, J., et al. "Exploring habitat credits to manage the benthic impact in a mixed fishery." Mar. Ecol.-Prog. Ser.. 586 (2018): 167–179.
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Benedetti, F., et al. "Investigating uncertainties in zooplankton composition shifts under climate change scenarios in the Mediterranean Sea." Ecography. 41.2 (2018): 345–360.
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Benedetti, F., et al. "Do functional groups of planktonic copepods differ in their ecological niches?" J. Biogeogr.. 45.3 (2018): 604–616.
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Certain, G., F. Barraquand, and A. Gårdmark. "How do MAR(1) models cope with hidden nonlinearities in ecological dynamics?" Methods in Ecology and Evolution (2018).
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Chary, K., et al. "Cultivating biomass locally or importing it? LCA of biomass provision scenarios for cleaner electricity production in a small tropical island." Biomass Bioenerg.. 110 (2018): 1–12.
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Courbin, N., et al. "Short-term prey field lability constrains individual specialisation in resource selection and foraging site fidelity in a marine predator." Ecol. Lett.. 21.7 (2018): 1043–1054.
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Descombes, P., et al. "Linking species diversification to palaeo-environmental changes: A process-based modelling approach." Glob. Ecol. Biogeogr.. 27.2 (2018): 233–244.
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Helias, A., J. Langlois, and P. Freon. "Fisheries in life cycle assessment: Operational factors for biotic resources depletion." Fish. Fish.. 19.6 (2018): 951–963.
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Hoffle, H., et al. "Linking spawning ground extent to environmental factors – patterns and dispersal during the egg phase of four North Sea fishes." Can. J. Fish. Aquat. Sci.. 75.3 (2018): 357–374.
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Krichen, E., et al. "High biomass density promotes density-dependent microbial growth rate." Biochem. Eng. J.. 130 (2018): 66–75.
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Lefevre, S., D. J. McKenzie, and G. E. Nilsson. "In modelling effects of global warming, invalid assumptions lead to unrealistic projections." Glob. Change Biol.. 24.2 (2018): 553–556.
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Mannocci, L., et al. "Assessing cetacean surveys throughout the Mediterranean Sea: a gap analysis in environmental space." Sci Rep. 8 (2018): 3126.
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Meddeb, M., et al. "Plankton food-web functioning in anthropogenically impacted coastal waters (SW Mediterranean Sea): an ecological network analysis." Progress in Oceanography (2018).
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Ortega-Cisneros, K., et al. "Evaluating the specificity of ecosystem indicators to fishing in a changing environment: A model comparison study for the southern Benguela ecosystem." Ecological Indicators. 95 (2018): 85–98.
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Ramirez-Romero, E., et al. "Quantifying top-down control and ecological traits of the scyphozoan Aurelia aurita through a dynamic plankton model." J. Plankton Res.. 40.6 (2018): 678–692.
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Shin, Y. - J., et al. "The specificity of marine ecological indicators to fishing in the face of environmental change: A multi-model evaluation." Ecological Indicators. 89 (2018): 317–326.
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Skowronek, S., et al. "Transferability of species distribution models for the detection of an invasive alien bryophyte using imaging spectroscopy data." International Journal of Applied Earth Observation and Geoinformation. 68 (2018): 61–72.
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Yates, K. L., et al. "Outstanding Challenges in the Transferability of Ecological Models." Trends Ecol. Evol.. 33.10 (2018): 790–802.
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2017

Abgrall, C., et al. "Shifts and linkages of functional diversity between above- and below-ground compartments along a flooding gradient." Funct. Ecol.. 31.2 (2017): 350–360.
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Authier, M., C. Saraux, and C. Péron. "Variable selection and accurate predictions in habitat modelling: a shrinkage approach." Ecography. 40.4 (2017): 549–560.
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Bender, M. G., et al. "Isolation drives taxonomic and functional nestedness in tropical reef fish faunas." Ecography. 40.3 (2017): 425–435.
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Coll, M., and J. Steenbeek. "Standardized ecological indicators to assess aquatic food webs: The ECOIND software plug-in for Ecopath with Ecosim models." Environ. Modell. Softw.. 89 (2017): 120–130.
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Diankha, O., et al. "Studying the contribution of different fishing gears to the Sardinella small-scale fishery in Senegalese waters." Aquat. Living Resour.. 30 (2017): 27.
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Fiandrino, A., et al. "Spatial patterns in coastal lagoons related to the hydrodynamics of seawater intrusion." Mar. Pollut. Bull.. 119.1 (2017): 132–144.
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Grehan, A. J., et al. "Towards ecosystem based management and monitoring of the deep Mediterranean, North-East Atlantic and Beyond." Deep-Sea Res. Part II-Top. Stud. Oceanogr.. 145 (2017): 1–7.
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Kaplan, D. M., et al. "Uncertainty in empirical estimates of marine larval connectivity." ICES J. Mar. Sci.. 74.6 (2017): 1723–1734.
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Loiseau, N., et al. "Multi-component β-diversity approach reveals conservation dilemma between species and functions of coral reef fishes." J. Biogeogr.. 44.3 (2017): 537–547.
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Oliveros-Ramos, R., et al. "A sequential approach to calibrate ecosystem models with multiple time series data." Progress in Oceanography. 151 (2017): 227–244.
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Ottimofiore, E., et al. "Responses of coral reef fishes to past climate changes are related to life-history traits." Ecol. Evol.. 7.6 (2017): 1996–2005.
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Pennino, M. G., et al. "Habitat modeling for cetacean management: Spatial distribution in the southern Pelagos Sanctuary (Mediterranean Sea)." Deep Sea Research Part II: Topical Studies in Oceanography (2017): 203–211.
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Torres-Irineo, E., et al. "Adaptive responses of tropical tuna purse-seiners under temporal regulations." Ambio. 46.1 (2017): 88–97.
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Xing, L., et al. "An individual-based model for simulating the ecosystem dynamics of Jiaozhou Bay, China." Ecological Modelling. 360.Supplement C (2017): 120–131.
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2016

Bertrand, A., et al. "3-D habitat suitability of jack mackerel Trachurus murphyi in the Southeastern Pacific, a comprehensive study." Prog. Oceanogr.. 146 (2016): 199–211.
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Boavida, J., et al. "Overlooked habitat of a vulnerable gorgonian revealed in the Mediterranean and Eastern Atlantic by ecological niche modelling." Sci Rep. 6 (2016): 36460.
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Boyd, C., et al. "Effectiveness of social information used by seabirds searching for unpredictable and ephemeral prey." Behav. Ecol.. 27.4 (2016): 1223–1234.
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Cazelles, K., et al. "On the integration of biotic interaction and environmental constraints at the biogeographical scale." Ecography. 39.10 (2016): 921–931.
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Coll, M., et al. "Modelling the cumulative spatial-temporal effects of environmental drivers and fishing in a NW Mediterranean marine ecosystem." Ecol. Model.. 331 (2016): 100–114.
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Drouineau, H., et al. "The need for a protean fisheries science to address the degradation of exploited aquatic ecosystems." Aquat. Living Resour.. 29.2 (2016): Unsp-E201.
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Dueri, S., et al. "Food security or economic profitability? Projecting the effects of climate and socioeconomic changes on global skipjack tuna fisheries under three management strategies." Global Environmental Change. 41 (2016): 1–12.
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Escalle, L., et al. "Environmental factors and megafauna spatio-temporal co-occurrence with purse-seine fisheries." Fish. Oceanogr.. 25.4 (2016): 433–447.
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Grüss, A., et al. "Management strategy evaluation using the individual-based, multispecies modeling approach OSMOSE." Ecological Modelling. 340 (2016): 86–105.
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Grüss, A., et al. "Estimating natural mortality rates and simulating fishing scenarios for Gulf of Mexico red grouper (Epinephelus morio) using the ecosystem model OSMOSE-WFS." Journal of Marine Systems. 154, Part B (2016): 264–279.
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Guiet, J., J. - C. Poggiale, and O. Maury. "Modelling the community size-spectrum: recent developments and new directions." Ecological Modelling. 337 (2016): 4–14.
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Halouani, G., et al. "Modelling food web structure using an end-to-end approach in the coastal ecosystem of the Gulf of Gabes (Tunisia)." Ecological Modelling. 339 (2016): 45–57.
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Heymans, J. J., et al. "Best practice in Ecopath with Ecosim food-web models for ecosystem-based management." Ecol. Model.. 331 (2016): 173–184.
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Jacquet, C., et al. "No complexity-stability relationship in empirical ecosystems." Nat. Commun.. 7 (2016): 12573.
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Kadowaki, K., et al. "Predicting biotic interactions and their variability in a changing environment." Biol. Lett.. 12.5 (2016): 20151073.
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Kirkman, S. P., et al. "Spatial characterisation of the Benguela ecosystem for ecosystem-based management." Afr. J. Mar. Sci.. 38.1 (2016): 7–22.
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Mante, C., et al. "Fitting the truncated negative binomial distribution to count data A comparison of estimators, with an application to groundfishes from the Mauritanian Exclusive Economic Zone." Environ. Ecol. Stat.. 23.3 (2016): 359–385.
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Monsarrat, S., et al. "A spatially explicit estimate of the prewhaling abundance of the endangered North Atlantic right whale." Conserv. Biol.. 30.4 (2016): 783–791.
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Passuni, G., et al. "Seasonality in marine ecosystems: Peruvian seabirds, anchovy, and oceanographic conditions." Ecology. 97.1 (2016): 182–193.
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Si, X., et al. "Selective extinction drives taxonomic and functional alpha and beta diversities in island bird assemblages." J Anim Ecol. 85.2 (2016): 409–418.
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Thiebault, A., et al. "How to capture fish in a school? Effect of successive predator attacks on seabird feeding success." J Anim Ecol. 85.1 (2016): 157–167.
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Vendeville, P., et al. "Restoring the ecosystem creates wealth. The case of the Northern coast of Tunisia’s deep-water rose shrimp trawl fishery." Fisheries Research. 183 (2016): 55–73.
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Villon, S., et al. "Coral Reef Fish Detection and Recognition in Underwater Videos by Supervised Machine Learning: Comparison Between Deep Learning and HOG plus SVM Methods." Eds. J. BlancTalon, et al. Advanced Concepts for Intelligent Vision Systems, Acivs 2016, 10016. Cham: Springer Int Publishing Ag, 2016. 160–171.
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2015

Albouy, C., et al. "FishMed: traits, phylogeny, current and projected species distribution of Mediterranean fishes, and environmental data." Ecology. 96.8 (2015): 2312–2313.
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Andrello, M., et al. "Additive effects of climate change on connectivity between marine protected areas and larval supply to fished areas." Diversity Distrib.. 21.2 (2015): 139–150.
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Arrizabalaga, H., et al. "Global habitat preferences of commercially valuable tuna." Deep Sea Research Part II: Topical Studies in Oceanography. 113 (2015): 102–112.
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Christensen, V., et al. "The global ocean is an ecosystem: simulating marine life and fisheries." Global Ecology and Biogeography. 24.5 (2015): 507–517.
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Coll, M., et al. "Modelling dynamic ecosystems: venturing beyond boundaries with the Ecopath approach." Rev Fish Biol Fisheries. 25.2 (2015): 413–424.
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Corrales, X., et al. "Ecosystem structure and fishing impacts in the northwestern Mediterranean Sea using a food web model within a comparative approach." Journal of Marine Systems. 148 (2015): 183–199.
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David, C., et al. "Understanding winter distribution and transport pathways of the invasive ctenophore Mnemiopsis leidyi in the North Sea: coupling habitat and dispersal modelling approaches." Biol. Invasions. 17.9 (2015): 2605–2619.
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Descombes, P., et al. "Forecasted coral reef decline in marine biodiversity hotspots under climate change." Glob Change Biol. 21.7 (2015): 2479–2487.
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