2021

Bourdaud, P., et al. "Impacts of climate change on the Bay of Seine ecosystem: Forcing a spatio-temporal trophic model with predictions from an ecological niche model." Fish Oceanogr. (2021).
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Chambault, P., et al. "A methodological framework to predict the individual and population-level distributions from tracking data." Ecography (2021).
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Kopf, R. K., et al. "Global patterns and predictors of trophic position, body size and jaw size in fishes." Glob. Ecol. Biogeogr.. 30.2 (2021): 414–428.
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Nogues, Q., et al. "Cumulative effects of marine renewable energy and climate change on ecosystem properties: Sensitivity of ecological network analysis." Ecol. Indic.. 121 (2021): 107128.
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Sala, E., et al. "Protecting the global ocean for biodiversity, food and climate." Nature (2021).
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Schickele, A., et al. "European small pelagic fish distribution under global change scenarios." Fish. Fish.. 22.1 (2021): 212–225.
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2020

Amemou, H., et al. "Assessment of a Lagrangian model using trajectories of oceanographic drifters and fishing devices in the Tropical Atlantic Ocean." Prog. Oceanogr.. 188 (2020): 102426.
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Ben Rais Lasram, F., et al. "An open-source framework to model present and future marine species distributions at local scale." Ecological Informatics. 59 (2020): 101130.
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Bonnin, L., et al. "Can drifting objects drive the movements of a vulnerable pelagic shark?" Aquat. Conserv.-Mar. Freshw. Ecosyst. (2020).
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Bouchet, P. J., et al. "dsmextra: Extrapolation assessment tools for density surface models." Methods Ecol. Evol.. 11.11 (2020): 1464–1469.
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Boulanger, E., et al. "Spatial graphs highlight how multi-generational dispersal shapes landscape genetic patterns." Ecography (2020).
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Caillibotte, R., et al. "Impact of oysters as top predators on microbial food web dynamics: a modelling approach with parameter optimisation." Mar. Ecol.-Prog. Ser.. 641 (2020): 79–100.
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Cardiec, F., et al. "“Too Big To Ignore”: A feasibility analysis of detecting fishing events in Gabonese small-scale fisheries." Plos One. 15.6 (2020): e0234091.
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Coelho, R., et al. "Local indicators for global species: Pelagic sharks in the tropical northeast Atlantic, Cabo Verde islands region." Ecological Indicators. 110 (2020): 105942.
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Crochelet, E., et al. "Connectivity between seamounts and coastal ecosystems in the Southwestern Indian Ocean." Deep-Sea Res. Part II-Top. Stud. Oceanogr.. 176 (2020): 104774.
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Demarcq, H., M. Noyon, and M. J. Roberts. "Satellite observations of phytoplankton enrichments around seamounts in the South West Indian Ocean with a special focus on the Walters Shoal." Deep-Sea Res. Part II-Top. Stud. Oceanogr.. 176 (2020): 104800.
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Fu, C., et al. "The cumulative effects of fishing, plankton productivity, and marine mammal consumption in a marine ecosystem." Front. Mar. Sci.. 7 (2020).
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Handal, W., et al. "New insights on the population genetic structure of the great scallop (Pecten maximus) in the English Channel, coupling microsatellite data and demogenetic simulations." Aquat. Conserv.-Mar. Freshw. Ecosyst.. 30.10 (2020): 1841–1853.
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Heymans, J. J., et al. "The Ocean Decade: A True Ecosystem Modeling Challenge." Front. Mar. Sci.. 7 (2020): 554573.
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Huang, J. - L., et al. "Importance of spatio-temporal connectivity to maintain species experiencing range shifts." Ecography (2020).
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Husson, B., et al. "Suitable habitats of fish species in the Barents Sea." Fish Oceanogr.. 29.6 (2020): 526–540.
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Jaonalison, H., et al. "Predicting species richness and abundance of tropical post-larval fish using machine learning." Marine Ecology Progress Series. 645 (2020): 125–139.
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Jeliazkov, A., et al. "A global database for metacommunity ecology, integrating species, traits, environment and space." Sci. Data. 7.1 (2020): 6.
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Le Marchand, M., et al. "Climate change in the Bay of Biscay: Changes in spatial biodiversity patterns could be driven by the arrivals of southern species." Marine Ecology Progress Series. 647 (2020): 17–31.
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Lett, C., N. Barrier, and M. Bahlali. "Converging approaches for modeling the dispersal of propagules in air and sea." Ecol. Model.. 415 (2020): 108858.
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Mannocci, L., et al. "Predicting bycatch hotspots in tropical tuna purse seine fisheries at the basin scale." Global Ecology and Conservation. 24 (2020): e01393.
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Mannocci, L., et al. "Geographical differences in habitat relationships of cetaceans across an ocean basin." Ecography (2020).
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Morato, T., et al. "Climate-induced changes in the suitable habitat of cold-water corals and commercially important deep-sea fishes in the North Atlantic." Glob. Change Biol. (2020).
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Ouisse, V., et al. "Swinging boat moorings: Spatial heterogeneous damage to eelgrass beds in a tidal ecosystem." Estuarine, Coastal and Shelf Science. 235 (2020): 106581.
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Pagès, R., et al. "Projected effects of climate-induced changes in hydrodynamics on the biogeochemistry of the Mediterranean sea under the RCP 8.5 Regional Climate Scenario." Front. Mar. Sci.. 7 (2020).
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Pagès, R., et al. "Changes in rivers inputs during the last decades significantly impacted the biogeochemistry of the eastern Mediterranean basin: A modelling study." Prog. Oceanogr.. 181 (2020): 102242.
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Pete, R., et al. "A box-model of carrying capacity of the Thau lagoon in the context of ecological status regulations and sustainable shellfish cultures." Ecological Modelling. 426 (2020): 109049.
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Planque, B., and C. Mullon. "Modelling chance and necessity in natural systems." ICES J. Mar. Sci.. 77.4 (2020): 1573–1588.
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Reisser, C. M. O., et al. "Population Connectivity and Genetic Assessment of Exploited and Natural Populations of Pearl Oysters within a French Polynesian Atoll Lagoon." Genes. 11.4 (2020): 426.
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Reygondeau, G., et al. "Climate Change-Induced Emergence of Novel Biogeochemical Provinces." Front. Mar. Sci.. 7 (2020).
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Rodde, C., et al. "Variations in isotope incorporation rates and trophic discrimination factors of carbon and nitrogen stable isotopes in scales from three European sea bass (Dicentrarchus labrax) populations." J. Exp. Mar. Biol. Ecol.. 533 (2020): 151468.
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Schickele, A., et al. "European small pelagic fish distribution under global change scenarios." Fish and Fisheries (2020).
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Schickele, A., et al. "Modelling European small pelagic fish distribution: Methodological insights." Ecological Modelling. 416 (2020): 108902.
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Siegwalt, F., et al. "High fidelity of sea turtles to their foraging grounds revealed by satellite tracking and capture-mark-recapture: New insights for the establishment of key marine conservation areas." Biol. Conserv.. 250 (2020): 108742.
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Stephenson, F., et al. "Modelling the spatial distribution of cetaceans in New Zealand waters." Diversity and Distributions. 26.4 (2020): 495–516.
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Tagliabue, A., et al. "An iron cycle cascade governs the response of equatorial Pacific ecosystems to climate change." Glob. Change Biol.. 26.11 (2020): 6168–6179.
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Travers-Trolet, M., et al. "The Risky Decrease of Fishing Reference Points Under Climate Change." Front. Mar. Sci.. 7 (2020): 568232.
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Viblanc, V. A., et al. "Foster rather than biological parental telomere length predicts offspring survival and telomere length in king penguins." Mol. Ecol. (2020).
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2019

Ba, A., et al. "The potential impact of marine protected areas on the Senegalese sardinella fishery." Ocean Coastal Manage.. 169 (2019): 239–246.
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Bănaru, D., et al. "Implementation of an end-to-end model of the Gulf of Lions ecosystem (NW Mediterranean Sea). I. Parameterization, calibration and evaluation." Ecological Modelling. 401 (2019): 1–19.
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Benedetti, F., et al. "Climate change may have minor impact on zooplankton functional diversity in the Mediterranean Sea." Divers. Distrib.. 25.4 (2019): 568–581.
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Blanchard, F., C. Chaboud, and O. Thebaud. "Back to the future: A retrospective assessment of model-based scenarios for the management of the shrimp fishery in French Guiana facing global change." Nat. Resour. Model. (2019): e12232.
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Bryndum‐Buchholz, A., et al. "Twenty-first-century climate change impacts on marine animal biomass and ecosystem structure across ocean basins." Global Change Biology. 25.2 (2019): 459–472.
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Carvalho, P. G., et al. "Optimized fishing through periodically harvested closures." J. Appl. Ecol.. 56.8 (2019): 1927–1936.
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Chary, K., et al. "Modeling sea cage outputs for data-scarce areas: application to red drum (Sciaenops ocellatus) aquaculture in Mayotte, Indian Ocean." Aquacult Int (2019).
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Dalleau, M., et al. "Modeling the emergence of migratory corridors and foraging hot spots of the green sea turtle." Ecol. Evol. (2019).
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Diaz, F., et al. "Implementation of an end-to-end model of the Gulf of Lions ecosystem (NW Mediterranean Sea). II. Investigating the effects of high trophic levels on nutrients and plankton dynamics and associated feedbacks." Ecological Modelling. 405 (2019): 51–68.
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Donati, G. F. A., et al. "A process-based model supports an association between dispersal and the prevalence of species traits in tropical reef fish assemblages." Ecography (2019).
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Fu, C., et al. "Making ecological indicators management ready: Assessing the specificity, sensitivity, and threshold response of ecological indicators." Ecological Indicators. 105 (2019): 16–28.
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Gaboriau, T., et al. "Ecological constraints coupled with deep-time habitat dynamics predict the latitudinal diversity gradient in reef fishes." Proc. R. Soc. B-Biol. Sci.. 286.1911 (2019): 20191506.
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Grüss, A., et al. "Building bridges between global information systems on marine organisms and ecosystem models." Ecological Modelling. 398 (2019): 1–19.
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Henckel, L., et al. "On the relative importance of space and environment in farmland bird community assembly." PLoS One. 14.3 (2019): e0213360.
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Lembrechts, J. J., et al. "Comparing temperature data sources for use in species distribution models: From in-situ logging to remote sensing." Glob. Ecol. Biogeogr.. 28.11 (2019): 1578–1596.
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Lett, C., et al. "Modeling larval dispersal for the gilthead seabream in the northwestern Mediterranean Sea." Marine Environmental Research (2019): 104781.
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Lotze, H. K., et al. "Global ensemble projections reveal trophic amplification of ocean biomass declines with climate change." Pnas. 116.26 (2019): 12907–12912.
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Meddeb, M., et al. "A new type of plankton food web functioning in coastal waters revealed by coupling Monte Carlo Markov chain linear inverse method and ecological network analysis." Ecol. Indic.. 104 (2019): 67–85.
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Meynard, C. N., D. M. Kaplan, and B. Leroy. "Detecting outliers in species distribution data: Some caveats and clarifications on a virtual species study." J. Biogeogr.. 46.9 (2019): 2141–2144.
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Meynard, C. N., B. Leroy, and D. M. Kaplan. "Testing methods in species distribution modelling using virtual species: what have we learnt and what are we missing?" Ecography. 42.12 (2019): 2021–2036.
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Moullec, F., et al. "An End-to-End Model Reveals Losers and Winners in a Warming Mediterranean Sea." Front. Mar. Sci.. 6 (2019).
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Moullec, F., et al. "Capturing the big picture of Mediterranean marine biodiversity with an end-to-end model of climate and fishing impacts." Progress in Oceanography. 178 (2019): 102179.
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Pagès, R., et al. "Changes in rivers inputs during the last decades significantly impacted the biogeochemistry of the eastern Mediterranean basin: a modelling study." Progress in Oceanography (2019): 102242.
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Queiroz, N., et al. "Global spatial risk assessment of sharks under the footprint of fisheries." Nature. 572.7770 (2019): 461–+.
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Sadoul, B., et al. "Prediction of long-term variation in offspring metabolism due to BPA in eggs in rainbow trout using the DEB model." J. Sea Res.. 143 (2019): 222–230.
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Soissons, L. M., et al. "Sandification vs. muddification of tidal flats by benthic organisms: A flume study." Estuar. Coast. Shelf Sci.. 228 (2019): Unsp-106355.
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Spedicato, M. T., et al. "Spatial distribution of marine macro-litter on the seafloor in the northern Mediterranean Sea: the MEDITS initiative." Sci. Mar.. 83 (2019): 257–270.
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Virgili, A., et al. "Combining multiple visual surveys to model the habitat of deep-diving cetaceans at the basin scale." Global Ecology and Biogeography. 28.3 (2019): 300–314.
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2018

Ba, K., et al. "Long-term fishing impact on the Senegalese coastal demersal resources: diagnosing from stock assessment models." Aquat. Living Resour.. 31 (2018): 8.
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Batsleer, J., et al. "Exploring habitat credits to manage the benthic impact in a mixed fishery." Mar. Ecol.-Prog. Ser.. 586 (2018): 167–179.
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Benedetti, F., et al. "Investigating uncertainties in zooplankton composition shifts under climate change scenarios in the Mediterranean Sea." Ecography. 41.2 (2018): 345–360.
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Benedetti, F., et al. "Do functional groups of planktonic copepods differ in their ecological niches?" J. Biogeogr.. 45.3 (2018): 604–616.
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Certain, G., F. Barraquand, and A. Gårdmark. "How do MAR(1) models cope with hidden nonlinearities in ecological dynamics?" Methods in Ecology and Evolution (2018).
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Chary, K., et al. "Cultivating biomass locally or importing it? LCA of biomass provision scenarios for cleaner electricity production in a small tropical island." Biomass Bioenerg.. 110 (2018): 1–12.
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Courbin, N., et al. "Short-term prey field lability constrains individual specialisation in resource selection and foraging site fidelity in a marine predator." Ecol. Lett.. 21.7 (2018): 1043–1054.
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Descombes, P., et al. "Linking species diversification to palaeo-environmental changes: A process-based modelling approach." Glob. Ecol. Biogeogr.. 27.2 (2018): 233–244.
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Helias, A., J. Langlois, and P. Freon. "Fisheries in life cycle assessment: Operational factors for biotic resources depletion." Fish. Fish.. 19.6 (2018): 951–963.
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Hoffle, H., et al. "Linking spawning ground extent to environmental factors – patterns and dispersal during the egg phase of four North Sea fishes." Can. J. Fish. Aquat. Sci.. 75.3 (2018): 357–374.
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Krichen, E., et al. "High biomass density promotes density-dependent microbial growth rate." Biochem. Eng. J.. 130 (2018): 66–75.
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Lefevre, S., D. J. McKenzie, and G. E. Nilsson. "In modelling effects of global warming, invalid assumptions lead to unrealistic projections." Glob. Change Biol.. 24.2 (2018): 553–556.
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Mannocci, L., et al. "Assessing cetacean surveys throughout the Mediterranean Sea: a gap analysis in environmental space." Sci Rep. 8 (2018): 3126.
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Meddeb, M., et al. "Plankton food-web functioning in anthropogenically impacted coastal waters (SW Mediterranean Sea): an ecological network analysis." Progress in Oceanography (2018).
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Ortega-Cisneros, K., et al. "Evaluating the specificity of ecosystem indicators to fishing in a changing environment: A model comparison study for the southern Benguela ecosystem." Ecological Indicators. 95 (2018): 85–98.
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Ramirez-Romero, E., et al. "Quantifying top-down control and ecological traits of the scyphozoan Aurelia aurita through a dynamic plankton model." J. Plankton Res.. 40.6 (2018): 678–692.
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Shin, Y. - J., et al. "The specificity of marine ecological indicators to fishing in the face of environmental change: A multi-model evaluation." Ecological Indicators. 89 (2018): 317–326.
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Skowronek, S., et al. "Transferability of species distribution models for the detection of an invasive alien bryophyte using imaging spectroscopy data." International Journal of Applied Earth Observation and Geoinformation. 68 (2018): 61–72.
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Yates, K. L., et al. "Outstanding Challenges in the Transferability of Ecological Models." Trends Ecol. Evol.. 33.10 (2018): 790–802.
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2017

Abgrall, C., et al. "Shifts and linkages of functional diversity between above- and below-ground compartments along a flooding gradient." Funct. Ecol.. 31.2 (2017): 350–360.
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Authier, M., C. Saraux, and C. Péron. "Variable selection and accurate predictions in habitat modelling: a shrinkage approach." Ecography. 40.4 (2017): 549–560.
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Bender, M. G., et al. "Isolation drives taxonomic and functional nestedness in tropical reef fish faunas." Ecography. 40.3 (2017): 425–435.
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Coll, M., and J. Steenbeek. "Standardized ecological indicators to assess aquatic food webs: The ECOIND software plug-in for Ecopath with Ecosim models." Environ. Modell. Softw.. 89 (2017): 120–130.
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Diankha, O., et al. "Studying the contribution of different fishing gears to the Sardinella small-scale fishery in Senegalese waters." Aquat. Living Resour.. 30 (2017): 27.
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Fiandrino, A., et al. "Spatial patterns in coastal lagoons related to the hydrodynamics of seawater intrusion." Mar. Pollut. Bull.. 119.1 (2017): 132–144.
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Grehan, A. J., et al. "Towards ecosystem based management and monitoring of the deep Mediterranean, North-East Atlantic and Beyond." Deep-Sea Res. Part II-Top. Stud. Oceanogr.. 145 (2017): 1–7.
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Kaplan, D. M., et al. "Uncertainty in empirical estimates of marine larval connectivity." ICES J. Mar. Sci.. 74.6 (2017): 1723–1734.
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Loiseau, N., et al. "Multi-component β-diversity approach reveals conservation dilemma between species and functions of coral reef fishes." J. Biogeogr.. 44.3 (2017): 537–547.
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Oliveros-Ramos, R., et al. "A sequential approach to calibrate ecosystem models with multiple time series data." Progress in Oceanography. 151 (2017): 227–244.
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Ottimofiore, E., et al. "Responses of coral reef fishes to past climate changes are related to life-history traits." Ecol. Evol.. 7.6 (2017): 1996–2005.
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Pennino, M. G., et al. "Habitat modeling for cetacean management: Spatial distribution in the southern Pelagos Sanctuary (Mediterranean Sea)." Deep Sea Research Part II: Topical Studies in Oceanography (2017): 203–211.
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Torres-Irineo, E., et al. "Adaptive responses of tropical tuna purse-seiners under temporal regulations." Ambio. 46.1 (2017): 88–97.
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Xing, L., et al. "An individual-based model for simulating the ecosystem dynamics of Jiaozhou Bay, China." Ecological Modelling. 360.Supplement C (2017): 120–131.
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2016

Bertrand, A., et al. "3-D habitat suitability of jack mackerel Trachurus murphyi in the Southeastern Pacific, a comprehensive study." Prog. Oceanogr.. 146 (2016): 199–211.
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Boavida, J., et al. "Overlooked habitat of a vulnerable gorgonian revealed in the Mediterranean and Eastern Atlantic by ecological niche modelling." Sci Rep. 6 (2016): 36460.
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Boyd, C., et al. "Effectiveness of social information used by seabirds searching for unpredictable and ephemeral prey." Behav. Ecol.. 27.4 (2016): 1223–1234.
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Cazelles, K., et al. "On the integration of biotic interaction and environmental constraints at the biogeographical scale." Ecography. 39.10 (2016): 921–931.
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