2018 |
Aubin, J., et al. "Blue mussel (Mytilus edulis) bouchot culture in Mont-St Michel Bay: potential mitigation effects on climate change and eutrophication." Int. J. Life Cycle Assess.. 23.5 (2018): 1030–1041.
Résumé: Bivalve production is an important aquaculture activity worldwide, but few environmental assessments have focused on it. In particular, bivalves' ability to extract nutrients from the environment by intensely filtering water and producing a shell must be considered in the environmental assessment. LCA of blue mussel bouchot culture (grown out on wood pilings) in Mont Saint-Michel Bay (France) was performed to identify its impact hotspots. The chemical composition of mussel flesh and shell was analyzed to accurately identify potential positive effects on eutrophication and climate change. The fate of mussel shells after consumption was also considered. Its potential as a carbon-sink is influenced by assumptions made about the carbon sequestration in wooden bouchots and in the mussel shell. The fate of the shells which depends on management of discarded mussels and household waste plays also an important role. Its carbon-sink potential barely compensates the climate change impact induced by the use of fuel used for on-site transportation. The export of N and P in mussel flesh slightly decreases potential eutrophication. Environmental impacts of blue mussel culture are determined by the location of production and mussel yields, which are influenced by marine currents and the distance to on-shore technical base. Bouchot mussel culture has low environmental impacts compared to livestock systems, but the overall environmental performances depend on farming practices and the amount of fuel used. Changes to the surrounding ecosystem induced by high mussel density must be considered in future LCA studies.
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Avadi, A., et al. "Environmental assessment of the Peruvian industrial hake fishery with LCA." Int. J. Life Cycle Assess.. 23.5 (2018): 1126–1140.
Résumé: The Peruvian hake (Merluccius gayi peruanus) stock has been in a delicate state in the last decades due to overexploitation combined with adverse climatic events. The stock is showing certain signs of recovery since 2012. This work analyses the environmental impacts of current fleet operations and its likely trend. The fleet was divided into coherent segments, per holding capacity and engine power. The validity of both segmentations, as well as the presence of an effect of economies of scale driving fuel use intensity (FUI), was tested. Life cycle assessment was used to calculate environmental impacts, per individual sampled vessel and per segment, complemented with indicators of energy efficiency and biotic resource depletion. The fleet is highly fuel-efficient (120 kg fuel per tonne fish) when compared with other reported values, despite a large overcapacity that increases the impact of the construction and maintenance phases. Significant inter-annual FUI variations were observed (80.0 kg t(-1) in 2008 to 210.3 kg t(-1) in 2006), but no clear trend. Neither significant differences in FUI among fleet segments nor a clear effect of economies of scale were found (but FUI analysis was based on a small sample of 32 values for nine vessels, two of which had data for a single year). Only the largest vessels, featuring 242 m(3) holding capacity and 850 hp engine power, were found to have lower FUI than any of the other vessels, but no statistical test could be applied to validate this difference. Differences in environmental impacts of individual vessels are mostly dominated by their relative FUI. Fuel use and, to a lower extent, maintenance are the main sources of environmental impacts. The most contributing impacts to ReCiPe single score are climate change, human toxicity and fossil depletion. The fishery's impacts on the biotic natural resource were orders of magnitude higher than many other global hake stocks, due to overexploitation. The environmental impacts of the national hake fleet are relatively low during the study period, despite an overcapacity of the fleet. With the perspective of expanding its operations and obtaining better yields on the eventuality that the stock fully recovers, these impacts should decrease. More research based on additional FUI data is necessary to effectively compare the performance of these vessels with larger ones (featuring > 180 m(3) and > 500 hp, of which nine existed in 2016) before possibly recommending their preferential use.
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Helias, A., J. Langlois, and P. Freon. "Fisheries in life cycle assessment: Operational factors for biotic resources depletion." Fish. Fish.. 19.6 (2018): 951–963.
Résumé: Life cycle assessment (LCA) is the normed and international framework for assessing the environmental impacts of most human activities. LCA is commonly used to assess various aspects of fisheries but is only at the onset for estimating impacts of fish removal. This study proposes original characterization factors (CFs) to quantify impacts on biotic resources using the mass of fish caught. This mid-point assessment occurs in impact pathways leading to natural resources, one of the three areas of protection in LCA, and thus fisheries can be compared according to the depleted stock fraction. CFs are defined by the marginal approach applied to the Schaefer model, representing the dynamics of the stocks. They combine catches, current biomass and maximum intrinsic growth rates, determined from the application of the CMSY algorithm (Froese etal. (2017), Fish Fish, 18, 506) with FAO and FishBase data. A multistock CF is also proposed and used for multispecies-stocks. CFs for the 4,993 stocks defined from global FAO areas are obtained and sorted according to the robustness of the model hypotheses. CF values among stocks generally tend to decrease when fish catches increase because high catches are generally associated with abundant stocks. Multispecies-stocks CFs for the northeast Atlantic Ocean are compared to ICES-based CFs and are reliable for the main fished stocks. With this simple and generic structure, this operational fish resource depletion potential could be extended to other biotic resources.
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Kara, M. H., et al. "Dynamics of Research in Aquaculture in North Africa and Support for Sustainable Development and Innovation." Rev. Fish. Sci. Aquac... 26.3 (2018): 309–318.
Résumé: This article examines the supporting role of research in the development of marine aquaculture in the aquaculture-producing countries of North Africa: Algeria, Egypt, Morocco, and Tunisia. Research plays a significant role not only in the support of the development of the sector, but also in the evolution toward sustainable aquaculture practices and a better integrated management of this activity. This analysis was conducted as part of the Aquamed project whose main objective was to create a multi-stakeholder platform (institutional decision makers, producers, researchers, NGOs, etc.) to strengthen cooperation and stimulate innovation for sustainable aquaculture in the Mediterranean. In particular, the Aquamed project aimed at an exploration of forms of collaboration through the identification of sub-groups of countries whose similarity of situations or challenges could help promote dialogue. The study of aquaculture and research in the countries reveals the contrasted situations between Egypt and the three western North African countries (Algeria, Morocco, and Tunisia). The analysis of research capabilities was carried out on the basis of several indicators, which were compiled from a survey among the relevant main institutes in the various countries, as well as from bibliometric research on the publications produced in the field of aquaculture. Beyond the differences identified among the countries, the analysis emphasizes the similarity of the challenges and the benefits of strengthening collaborations on a sub-regional scale.
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Maire, E., et al. "Community-wide scan identifies fish species associated with coral reef services across the Indo-Pacific." Proc. R. Soc. B-Biol. Sci.. 285.1883 (2018): 20181167.
Résumé: Determining whether many functionally complementary species or only a subset of key species are necessary to maintain ecosystem functioning and services is a critical question in community ecology and biodiversity conservation. Identifying such key species remains challenging, especially in the tropics where many species co-occur and can potentially support the same or different processes. Here, we developed a new community-wide scan CWS) approach, analogous to the genome-wide scan, to identify fish species that significantly contribute, beyond the socio-environmental and species richness effects, to the biomass and coral cover on Indo-Pacific reefs. We found that only a limited set of species (51 out of approx. 400, = approx. 13%), belonging to various functional groups and evolutionary lineages, are strongly and positively associated with fish biomass and live coral cover. Many of these species have not previously been identified as functionally important, and thus may be involved in unknown, yet important, biological mechanisms that help sustain healthy and productive coral reefs. CWS has the potential to reveal species that are key to ecosystem functioning and services and to guide management strategies as well as new experiments to decipher underlying causal ecological processes.
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Miloslavich, P., et al. "Essential ocean variables for global sustained observations of biodiversity and ecosystem changes." Global Change Biology. 24.6 (2018): 2416–2433.
Résumé: Sustained observations of marine biodiversity and ecosystems focused on specific conservation and management problems are needed around the world to effectively mitigate or manage changes resulting from anthropogenic pressures. These observations, while complex and expensive, are required by the international scientific, governance and policy communities to provide baselines against which the effects of human pressures and climate change may be measured and reported, and resources allocated to implement solutions. To identify biological and ecological essential ocean variables (EOVs) for implementation within a global ocean observing system that is relevant for science, informs society, and technologically feasible, we used a driver-pressure-state-impact-response (DPSIR) model. We (1) examined relevant international agreements to identify societal drivers and pressures on marine resources and ecosystems, (2) evaluated the temporal and spatial scales of variables measured by 100+ observing programs, and (3) analysed the impact and scalability of these variables and how they contribute to address societal and scientific issues. EOVs were related to the status of ecosystem components (phytoplankton and zooplankton biomass and diversity, and abundance and distribution of fish, marine turtles, birds and mammals), and to the extent and health of ecosystems (cover and composition of hard coral, seagrass, mangrove and macroalgal canopy). Benthic invertebrate abundance and distribution and microbe diversity and biomass were identified as emerging EOVs to be developed based on emerging requirements and new technologies. The temporal scale at which any shifts in biological systems will be detected will vary across the EOVs, the properties being monitored and the length of the existing time-series. Global implementation to deliver useful products will require collaboration of the scientific and policy sectors and a significant commitment to improve human and infrastructure capacity across the globe, including the development of new, more automated observing technologies, and encouraging the application of international standards and best practices.
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Passuni, G., et al. "Long-term changes in the breeding seasonality of Peruvian seabirds and regime shifts in the Northern Humboldt Current System." Mar. Ecol.-Prog. Ser.. 597 (2018): 231–242.
Résumé: In the highly productive Northern Humboldt Current System, 3 seabird species, the Guanay cormorant Phalacrocorax bougainvillii, the Peruvian booby Sula variegata and the Peruvian pelican Pelecanus thagus, commence breeding in austral spring, coinciding with the lowest availability of their prey, the Peruvian anchovy Engraulis ringens. This strategy ensures the matching of increased prey availability when young achieve independence in summer. This pattern was observed during the last decade when anchovy was abundant. However, over the last century, the abundance of anchovy has varied widely due to contrasting interdecadal regimes in oceanographic conditions and fishing activity. We hypothesized that these regime shifts affected the abundance and availability of prey and may have conditioned the breeding seasonality of seabirds. We examined the timing and magnitude of the onset of breeding using dynamic occupancy models and related these parameters to the seasonality of oceanographic conditions, abundance of anchovy and fishing pressure. During a regime of lower anchovy abundance (1977-1990), cormorants showed the highest flexibility, adjusting the timing of breeding from spring to winter and skipping reproduction in the worst conditions. Boobies showed the lowest flexibility, maintaining the same magnitude and timing of onset of breeding in spring. Pelicans showed intermediate flexibility, foregoing breeding during the worst conditions, but maintaining the onset of breeding in spring. The 3 species used sea surface temperature as a cue for the initiation of breeding. Furthermore, given their better diving abilities, cormorants could monitor prey availability changes associated with the reversion in the seasonality of the oxycline depth.
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Ramirez-Romero, E., et al. "Quantifying top-down control and ecological traits of the scyphozoan Aurelia aurita through a dynamic plankton model." J. Plankton Res.. 40.6 (2018): 678–692.
Résumé: Aurelia aurita (Linneaus, 1758) is a cosmopolitan scyphozoan, probably the most investigated jellyfish in temperate and highly productive coastal ecosystems. Despite a prominent top-down control in plankton food webs, a mechanistic understanding of A. aurita population dynamics and trophic interactions has been barely addressed. Here we develop a food web dynamic model to assess A. aurita role in the seasonal plankton dynamics of the Kiel Fjord, southwestern Baltic Sea. The model couples low trophic level dynamics, based on a classical Nutrient Phytoplankton Zooplankton Detritus (NPZD) model, to a stage-resolved copepod model (referencing Pseudocalanus sp.) and a jellyfish model (A. aurita ephyra and medusa) as consumers and predators, respectively. Simulations showed the relevance of high abundances of A. aurita, which appear related with warm winter temperatures, promoting a shift from a copepod-dominated food web to a ciliate and medusa dominated one. The model captured the intraspecific competition triggered by the medusae abundance and characterized by a negative relationship between population density and individual size/weight. Our results provide a mechanistic understanding of an emergent trait such as size shaping the food web functioning, driving predation rates and population dynamics of A. aurita, driving its sexual reproductive strategy at the end of the pelagic phase.
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Teixido, N., et al. "Functional biodiversity loss along natural CO2 gradients." Nat. Commun.. 9 (2018): 5149.
Résumé: The effects of environmental change on biodiversity are still poorly understood. In particular, the consequences of shifts in species composition for marine ecosystem function are largely unknown. Here we assess the loss of functional diversity, i.e. the range of species biological traits, in benthic marine communities exposed to ocean acidification (OA) by using natural CO2 vent systems. We found that functional richness is greatly reduced with acidification, and that functional loss is more pronounced than the corresponding decrease in taxonomic diversity. In acidified conditions, most organisms accounted for a few functional entities (i.e. unique combination of functional traits), resulting in low functional redundancy. These results suggest that functional richness is not buffered by functional redundancy under OA, even in highly diverse assemblages, such as rocky benthic communities.
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Thomas, J. K., et al. "Bisphenol A in Eggs Impairs the Long-Term Stress Performance of Rainbow Trout in Two Generations." Environ. Sci. Technol.. 52.14 (2018): 7951–7961.
Résumé: Salmonids are ecologically, economically, and culturally important fish species in North America, but whether contaminants in the environment play a role in their population decline is unclear. We tested the hypothesis that bisphenol A (BPA) deposition in eggs, mimicking a maternal transfer scenario, compromises the stress axis functioning and target tissues stress response in two generations of a model salmonid species, rainbow trout (Oncorhynchus mykiss). Eggs were enriched with 0, 4, or 40 ng of BPA, fertilized, and reared in clean water for two generations. The fish were subjected to an acute stressor after a year in both generations to test their stress performances. Trout raised from BPA-enriched eggs showed impaired stressor-mediated plasma cortisol and lactate response in the Fl and F2 generations, respectively. Key genes involved in cortisol biosynthesis in the head kidney, as well as stress- and growth-related transcripts in the liver and muscle, were impacted either in the F1 and/or F2 generations. Our results underscore the long-term impact associated with BPA in eggs, mimicking a maternal transfer scenario, on the stress performance of trout in two generations. The results highlight the need for developing novel biomarkers to predict long-term and generational toxicities in salmonids.
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2017 |
Andrello, M., et al. "Global mismatch between fishing dependency and larval supply from marine reserves." Nat. Commun.. 8 (2017): 16039.
Résumé: Marine reserves are viewed as flagship tools to protect exploited species and to contribute to the effective management of coastal fisheries. Yet, the extent to which marine reserves are globally interconnected and able to effectively seed areas, where fisheries are most critical for food and livelihood security is largely unknown. Using a hydrodynamic model of larval dispersal, we predict that most marine reserves are not interconnected by currents and that their potential benefits to fishing areas are presently limited, since countries with high dependency on coastal fisheries receive very little larval supply from marine reserves. This global mismatch could be reversed, however, by placing new marine reserves in areas sufficiently remote to minimize social and economic costs but sufficiently connected through sea currents to seed the most exploited fisheries and endangered ecosystems.
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Bessa, E., B. Geffroy, and E. Gonçalves-De-Freitas. "Tourism impact on stream fish measured with an ecological and a behavioural indicator." Aquatic Conserv: Mar Freshw Ecosyst (2017).
Résumé: * As nature-based tourism grows, its impacts on aquatic ecosystems follow, requiring effective management techniques to conserve river integrity. Nevertheless, strong indicators of tourism impacts are scarce and have seldom been studied for many species. * This study evaluated whether microhabitat use and activity period of a variety of fish species are effective for assessing tourism impacts in a headwater stream in which recreation (snorkelling) occurs. Microhabitat use and activity period of the most representative fish were observed in river stretches used for recreation and compared with reference stretches. * Fish neither altered microhabitat use nor became more cryptic owing to tourism, maybe because they have evolved to occupy a certain microhabitat and cannot inhabit others, thus making habitat use a poor indicator of tourism impact. * Fish respond to the presence of tourists by changing the promptness to begin and end activity, making the time of activity a good indicator of tourism impact, which can be easily assessed by tourism managers or government agencies and used to control the environmental impact of recreation involving fish. * It is suggested that aquatic conservation protocols should include local indicators, and that behavioural indicators (activity period) might be more relevant than ecological indicators (microhabitat use) for early recognition of tourism impacts. These findings can be extended to the conservation of other fish communities subject to intensive tourism and with a strong circadian rhythm, such as coral reef fishes.
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Boyd, C., et al. "Effects of variation in the abundance and distribution of prey on the foraging success of central place foragers." J. Appl. Ecol.. 54.5 (2017): 1362–1372.
Résumé: 1. Seabirds and pinnipeds are vulnerable to reductions in prey availability, especially during the breeding season when spatial constraints limit their adaptive capacity. There are growing concerns about the effects of fisheries on prey availability in regions where large commercial fisheries target forage fish. 2. For breeding seabirds and pinnipeds, prey availability depends on a combination of abundance, accessibility, patchiness and distance from the colony. An understanding of the aspects of prey availability that determine foraging success is essential for the design of effective management responses. 3. We used a mechanistic individual-based foraging model based on observed data for two sea-bird species, the Peruvian Booby Sula variegata and Guanay Cormorant Phalacrocorax bougainvilliorum, to simulate the foraging patterns of seabirds feeding on schooling fish. We ran the model over simulated prey fields representing eight possible combinations of high or low prey abundance, shallow or deep prey, and broadly distributed or spatially concentrated prey. 4. The results highlight the importance of the accessibility of prey. Depth distribution was the primary factor determining modelled foraging success for both species, followed by abundance, and then spatial configuration. 5. Synthesis and applications. The individual-based foraging model provides a spatially explicit framework for assessing the effects of fisheries on the foraging success of seabirds and other central place foragers, and for evaluating the potential effectiveness of marine-protected areas and other fisheries management strategies for safeguarding central place foragers in dynamic ecosystems. Our analysis indicates that broad-scale fisheries management strategies that maintain forage fish above critical biomass levels are essential, but may need to be supplemented by targeted actions, such as time-area closures, when environmental conditions lead to low prey abundance or reduce prey accessibility for seabirds or pinnipeds of conservation concern. The individual-based foraging model is adaptable and could be reconfigured for application to other species and systems.
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Coll, M., and J. Steenbeek. "Standardized ecological indicators to assess aquatic food webs: The ECOIND software plug-in for Ecopath with Ecosim models." Environ. Modell. Softw.. 89 (2017): 120–130.
Résumé: Ecological indicators are useful tools to analyse and communicate historical changes in ecosystems and plausible future scenarios while evaluating environmental status. Here we introduce a new plug-in to the Ecopath with Ecosim (EwE) food web modelling approach, which is widely used to quantitatively describe aquatic ecosystems. The plug-in (ECOIND) calculates standardized ecological indicators. We describe the primary functionality of ECOIND and provide an example of its application in both static and temporal-spatial dynamic modelling, while we highlight several related features including a new taxonomy input database (species traits) and the ability to analyse input uncertainty on output results. ECOIND adds new capabilities to the widely used EwE food web modelling approach and enables broadening its applications into biodiversity and conservation-based frameworks to contribute to integrated ecosystem analyses. (C) 2016 Elsevier Ltd. All rights reserved.
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Foveau, A., et al. "Process-driven and biological characterisation and mapping of seabed habitats sensitive to trawling." PLoS One. 12.10 (2017): e0184486.
Résumé: The increase of anthropogenic pressures on the marine environment together with the necessity of a sustainable management of marine living resources have underlined the need to map and model coastal environments, particularly for the purposes of spatial planning and for the implementation of integrated ecosystem-based management approach. The present study compares outputs of a process-driven benthic habitat sensitivity (PDS) model to the structure, composition and distribution of benthic invertebrates in the Eastern English Channel and southern part of the North Sea. Trawl disturbance indicators (TDI) computed from species biological traits and benthic community composition were produced from samples collected with a bottom trawl. The TDI was found to be highly correlated to the PDS further validating the latter's purpose to identify natural process-driven pattern of sensitivity. PDS was found to reflect an environmental potential that may no longer be fully observable in the field and difference with in situ biological observations could be partially explained by the spatial distribution of fishery pressure on the seafloor. The management implication of these findings are discussed and we suggest that, used in conjunction with TDI approaches, PDS may help monitor management effort by evaluating the difference between the current state and the presumed optimal environmental status of marine benthic habitats.
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Grazia Pennino, M., et al. "The analysis of convergence in ecological indicators: An application to the Mediterranean fisheries." Ecol. Indic.. 78 (2017): 449–457.
Résumé: Ecological indicators are increasingly used to examine the evolution of natural ecosystems and the impacts of human activities. Assessing their trends to develop comparative analyses is essential. We introduce the analysis of convergence, a novel approach to evaluate the dynamic and trends of ecological indicators and predict their behavior in the long-term. Specifically, we use a non-parametric estimation of Gaussian kernel density functions and transition probability matrix integrated in the R software. We validate the performance of our methodology through a practical application to three different ecological indicators to study whether Mediterranean countries converge towards similar fisheries practices. We focus on how distributions evolve over time for the Marine Trophic Index, the Fishing in Balance Index and the Expansion Factor during 1950-2010. Results show that Mediterranean countries persist in their fishery behaviors throughout the time series, although a tendency towards similar negative effects on the ecosystem is apparent in the long-term. This methodology can be easily reproduced with different indicators and/or ecosystems in order to analyze ecosystem dynamics. (C) 2017 Elsevier Ltd. All rights reserved.
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Le Gouvello, R., et al. "Aquaculture and marine protected areas: Potential opportunities and synergies." Aquatic Conserv: Mar. Freshw. Ecosyst.. 27 (2017): 138–150.
Résumé: * To meet the Convention on Biological Diversity's Aichi Target 11 on marine biodiversity protection and Aichi Target 6 on sustainable fisheries by 2020, as well as the Sustainable Development Goal (SDG) 2 on food security and SDG 14 on oceans by 2030, there is an urgent need to rethink how best to reconcile nature conservation and sustainable development. * This paper argues for effective governance to support processes that apply principles of sustainable development and an ecosystem approach to decide about economic activities at sea such as aquaculture. It describes opportunities, benefits and synergies between aquaculture and MPAs as a basis for wider debate. The scope is not a comprehensive analysis of aquaculture and MPAs, but rather to present examples of positive interactions between aquaculture activities and MPAs. The unintended negative consequences are also discussed to present balanced arguments. * This work draws from four workshops held in 2015 and 2016 and used to collect information from about 100 experts representing various sectors and perspectives. * It is recognized that aquaculture is an important activity in terms of sustainable development. It can play a role in providing food security, poverty alleviation and economic resilience, in particular for MPA local communities, and contribute to wild stock enhancement, as an alternative to overfishing and for providing services to the ecosystem. * This study showed that there is a need from both aquaculture and MPA sides for clarity of objectives and willingness for open and extensive dialogue. The paper concludes by describing a number of tools and methods for supporting greater synergies between aquaculture and MPAs. * The results from this work have already helped to build a common understanding between conservation and aquaculture and initiate a rapprochement for increasing synergies.
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Lucena-Fredou, F., et al. "Vulnerability of teleosts caught by the pelagic tuna longline fleets in South Atlantic and Western Indian Oceans." Deep-Sea Res. Part II-Top. Stud. Oceanogr.. 140 (2017): 230–241.
Résumé: Productivity and Susceptibility Analysis (PSA) is a methodology for evaluating the vulnerability of a stock based on its biological productivity and susceptibility to fishing. In this study, we evaluated the vulnerability of 60 stocks of tuna, billfishes and other teleosts caught by the tuna longline fleets operating in the South Atlantic and Indian Ocean using a semi-quantitative PSA. We (a) evaluated the vulnerability of the species in the study areas; (b) compared the vulnerability of target and non-target species and oceans; (c) analyzed the sensitivity of data entry; and (d) compared the results of the PSA to other fully quantitative assessment methods. Istiophoridae exhibited the highest scores for vulnerability. The top 10 species at risk were: Atlantic Istiophorus albicans; Indian Ocean Istiompax indica; Atlantic Makaira nigricans and Thunnus alalunga; Indian Ocean Xiphias gladius; Atlantic T. albacares, Gempylus serpens, Ranzania laevis and X. gladius; and Indian Ocean T. alalunga. All species considered at high risk were targeted or were commercialized bycatch, except for the Atlantic G. serpens and R. laevis which.were discarded, and may be considered as a false positive. Those species and others at high risk should be prioritized for further assessment and/or data collection. Most species at moderate risk were bycatch species kept for sale. Conversely, species classified at low risk were mostly discarded. Overall, species at high risk were overfished and/or subjected to overfishing. Moreover, all species considered to be within extinction risk (Critically Endangered, Endangered and Vulnerable) were in the high risk category. The good concordance between approaches corroborates the results of our analysis. PSA is not a replacement for traditional stock assessments, where a stock is assessed at regular intervals to provide management advice. It is of importance, however, where there is uncertainty about catches and life history parameters, since it can identify species at risk, and where management action and data collection is required, e.g. for many species at high and most at moderate risk in the South Atlantic and Indian oceans.
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2016 |
Cinner, J. E., et al. "Bright spots among the world’s coral reefs." Nature. 535.7612 (2016): 416–419.
Résumé: Ongoing declines in the structure and function of the world’s coral reefs require novel approaches to sustain these ecosystems and the millions of people who depend on them. A presently unexplored approach that draws on theory and practice in human health and rural development is to systematically identify and learn from the ‘outliers’—places where ecosystems are substantially better (‘bright spots’) or worse (‘dark spots’) than expected, given the environmental conditions and socioeconomic drivers they are exposed to. Here we compile data from more than 2,500 reefs worldwide and develop a Bayesian hierarchical model to generate expectations of how standing stocks of reef fish biomass are related to 18 socioeconomic drivers and environmental conditions. We identify 15 bright spots and 35 dark spots among our global survey of coral reefs, defined as sites that have biomass levels more than two standard deviations from expectations. Importantly, bright spots are not simply comprised of remote areas with low fishing pressure; they include localities where human populations and use of ecosystem resources is high, potentially providing insights into how communities have successfully confronted strong drivers of change. Conversely, dark spots are not necessarily the sites with the lowest absolute biomass and even include some remote, uninhabited locations often considered near pristine. We surveyed local experts about social, institutional, and environmental conditions at these sites to reveal that bright spots are characterized by strong sociocultural institutions such as customary taboos and marine tenure, high levels of local engagement in management, high dependence on marine resources, and beneficial environmental conditions such as deep-water refuges. Alternatively, dark spots are characterized by intensive capture and storage technology and a recent history of environmental shocks. Our results suggest that investments in strengthening fisheries governance, particularly aspects such as participation and property rights, could facilitate innovative conservation actions that help communities defy expectations of global reef degradation.
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Coll, M., et al. "Ecological indicators to capture the effects of fishing on biodiversity and conservation status of marine ecosystems." Ecological Indicators. 60 (2016): 947–962.
Résumé: IndiSeas (“Indicators for the Seas”) is a collaborative international working group that was established in 2005 to evaluate the status of exploited marine ecosystems using a suite of indicators in a comparative framework. An initial shortlist of seven ecological indicators was selected to quantify the effects of fishing on the broader ecosystem using several criteria (i.e., ecological meaning, sensitivity to fishing, data availability, management objectives and public awareness). The suite comprised: (i) the inverse coefficient of variation of total biomass of surveyed species, (ii) mean fish length in the surveyed community, (iii) mean maximum life span of surveyed fish species, (iv) proportion of predatory fish in the surveyed community, (v) proportion of under and moderately exploited stocks, (vi) total biomass of surveyed species, and (vii) mean trophic level of the landed catch. In line with the Nagoya Strategic Plan of the Convention on Biological Diversity (2011–2020), we extended this suite to emphasize the broader biodiversity and conservation risks in exploited marine ecosystems. We selected a subset of indicators from a list of empirically based candidate biodiversity indicators initially established based on ecological significance to complement the original IndiSeas indicators. The additional selected indicators were: (viii) mean intrinsic vulnerability index of the fish landed catch, (ix) proportion of non-declining exploited species in the surveyed community, (x) catch-based marine trophic index, and (xi) mean trophic level of the surveyed community. Despite the lack of data in some ecosystems, we also selected (xii) mean trophic level of the modelled community, and (xiii) proportion of discards in the fishery as extra indicators. These additional indicators were examined, along with the initial set of IndiSeas ecological indicators, to evaluate whether adding new biodiversity indicators provided useful additional information to refine our understanding of the status evaluation of 29 exploited marine ecosystems. We used state and trend analyses, and we performed correlation, redundancy and multivariate tests. Existing developments in ecosystem-based fisheries management have largely focused on exploited species. Our study, using mostly fisheries independent survey-based indicators, highlights that biodiversity and conservation-based indicators are complementary to ecological indicators of fishing pressure. Thus, they should be used to provide additional information to evaluate the overall impact of fishing on exploited marine ecosystems.
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Escalle, L., et al. "Consequences of fishing moratoria on catch and bycatch: the case of tropical tuna purse-seiners and whale and whale shark associated sets." Biodivers. Conserv.. 25.9 (2016): 1637–1659.
Résumé: Time-area regulations have been introduced to manage stocks of tropical tuna, given the increased use of drifting fish aggregation devices (FADs). However, the consequences in terms of changes in fishing strategies and effort reallocation may not always be as expected. For instance, in the eastern Pacific Ocean, previous studies have highlighted that the increase use of FAD-fishing following the demand for tuna caught without dolphin mortality has raised concerns about the bycatch and the capture of juvenile tuna. In the tropical eastern Atlantic and western Indian Oceans, this study aimed to (1) assess, using before-after analysis, the consequences of previous time-area regulations on FAD sets on the fishing effort allocated to megafauna associated sets, and (2) evaluate through Monte Carlo simulations the potential effect of new regulations banning whale or/and whale shark associated sets. Firstly, we showed that previous time-area regulations, which were mainly implemented during seasons with few whale and whale shark associated sets, generally had thus little effect on the number of megafauna associated sets. Secondly, some simulations, particularly when both whale and whale shark associated sets were banned, predicted consequences of changes in fishing strategy. Indeed, these types of ban could lead to an increase in the number of FAD and free school sets but no change in the tuna catch, as well as a slight decrease in bycatch. These results indicate that an ecosystem approach to fisheries, by taking into account megafauna associated sets and bycatch, should thus be adopted when implementing management or conservation measures.
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Giakoumi, S., et al. "Space invaders; biological invasions in marine conservation planning." Divers. Distrib.. 22.12 (2016): 1220–1231.
Résumé: AimBiological invasions are major contributors to global change and native biodiversity decline. However, they are overlooked in marine conservation plans. Here, we examine for the first time the extent to which marine conservation planning research has addressed (or ignored) biological invasions. Furthermore, we explore the change of spatial priorities in conservation plans when different approaches are used to incorporate the presence and impacts of invasive species. LocationGlobal analysis with a focus on the Mediterranean Sea region. MethodsWe conducted a systematic literature review consisting of three steps: (1) article selection using a search engine, (2) abstract screening and (3) review of pertinent articles, which were identified in the second step. The information extracted included the scale and geographical location of each case study as well as the approach followed regarding invasive species. We also applied the software Marxan to produce and compare conservation plans for the Mediterranean Sea that either protect, or avoid areas impacted by invasives, or ignore the issue. One case study focused on the protection of critical habitats, and the other on endemic fish species. ResultsWe found that of 119 papers on marine spatial plans in specific biogeographic regions, only three (2.5%) explicitly took into account invasive species. When comparing the different conservation plans for each case study, we found that the majority of selected sites for protection (ca. 80%) changed in the critical habitat case study, while this proportion was lower but substantial (27%) in the endemic fish species case study. Main conclusionsBiological invasions are being widely disregarded when planning for conservation in the marine environment across local to global scales. More explicit consideration of biological invasions can significantly alter spatial conservation priorities. Future conservation plans should explicitly account for biological invasions to optimize the selection of marine protected areas.
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Heymans, J. J., et al. "Best practice in Ecopath with Ecosim food-web models for ecosystem-based management." Ecol. Model.. 331 (2016): 173–184.
Résumé: Ecopath with Ecosim (EwE) models are easier to construct and use compared to most other ecosystem modelling techniques and are therefore more widely used by more scientists and managers. This, however, creates a problem with quality assurance; to address this we provide an overview of best practices for creating Ecopath, models. We describe the diagnostics that can be used to check for thermodynamic and ecological principles, and highlight principles that should be used for balancing a model. We then highlight the pitfalls when comparing Ecopath models using Ecological Network Analysis indices. For dynamic simulations in Ecosim we show the state of the art in calibrating the model by fitting it to time series using a formal fitting procedure and statistical goodness of fit. Finally, we show how Monte Carlo simulations can be used to address uncertainty in input parameters, and we discuss the use of models in a management context, specifically using the concept of 'key runs' for ecosystem-based management. This novel list of best practices for EwE models will enable ecosystem managers to evaluate the goodness of fit of the given EwE model to the ecosystem management question. (C) 2016 The Authors. Published by Elsevier B.V.
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Lucena Frédou, F., et al. "Life history traits and fishery patterns of teleosts caught by the tuna longline fishery in the South Atlantic and Indian Oceans." Fisheries Research. 179 (2016): 308–321.
Résumé: The identification and mitigation of adverse effects of the bycatch of tuna longline fishery have been mainly developed and implemented for seabirds, sharks and turtles and, the knowledge on teleost bycatch for this fishery, remains very poor. This paper contributes to a comprehensive assessment of life history traits and fishery attributes of target and bycatch species caught by the tuna longline fishery in the South Atlantic and Indian Oceans. Data was compiled on seven life history traits and three fishery attributes for 33 and 27 teleost stocks caught by longliners in South Atlantic and Indian Oceans, respectively. In addition, each species was assigned into four categories describing the fate of the catch: target species for commercial use, bycatch species kept for consumption, bycatch species kept for commercial use and discarded bycatch. Life history traits and fishery attributes did not differ between oceans. However, non-target but commercialized species were smaller in the Atlantic Ocean. Teleosts caught by the tuna longline fishery was segregated into three main groups: (1) the fast growing species represented mainly by dolphinfishes (Coryphaena hippurus and C. equisellis), skipjack tuna (Katsuwonus pelamis), kawakawa (Euthynnus affinis), bullet tuna (Auxis rochei), snoek (Thyrsites atun) and blackfin tuna (Thunnus atlanticus); (2) target tunas and most other bycatch species which were part of an intermediate group and (3) billfishes including swordfish representing the large and slow growing species with moderate to high market values and unknown or highly uncertain stock status. Investment in some key life history traits (such as growth coefficient) and the development of quantitative or semi-quantitative approaches (stock assessment and Ecological Risk Assessment) should be priorized as precautionary management measures for these species.
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Sheehan, E. V., et al. "An experimental comparison of three towed underwater video systems using species metrics, benthic impact and performance." Methods Ecol. Evol.. 7.7 (2016): 843–852.
Résumé: Managing ecological systems, which operate over large spatial scales, is inherently difficult and often requires sourcing data from different countries and organizations. The assumption might be made that data collected using similar methodologies are comparable, but this is rarely tested. Here, benthic video data recorded using different towed underwater video systems (TUVSs) were experimentally compared. Three technically different TUVSs were compared on different seabed types (rocky, mixed ground and sandy) in Kingmere Marine Conservation Zone, off the south coast of England. For each TUVS, species metrics (forward facing camera), seabed impact (backward facing camera) and operational performance (strengths and limitations of equipment and video footage) were compared with the aim of providing recommendations on their future use and comparability of data between different systems. Statistically significant differences between species richness, density, cover and assemblage composition were detected amongst devices and were believed to be mostly due to their optical specifications. As a result of their high image definition and large field of vision both the benthic contacting heavy and benthic tending TUVS provided good quality footage and ecological measurements. However, the heaviest TUVS proved difficult to operate on irregular ground and was found to cause the most impact to the seabed. The lightest TUVS (benthic contacting light) struggled to maintain contact with the seabed. The benthic tending TUVS was able to fly over variable seabed relief and was comparably the least destructive. Results from this study highlight that particular care should be given to sled and optic specifications when developing a medium- or long-term marine protected area monitoring programme. Furthermore, when using data gathered from multiple sources to test ecological questions, different equipment specifications may confound observed ecological differences. A benthic tending TUVS is recommended for benthic surveys over variable habitat types, particularly in sensitive areas, such as marine protected areas.
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2015 |
Albo-Puigserver, M., et al. "Feeding ecology and trophic position of three sympatric demersal chondrichthyans in the northwestern Mediterranean." Mar. Ecol.-Prog. Ser.. 524 (2015): 255–268.
Résumé: Understanding how marine predators interact is a scientific challenge. In marine ecosystems, segregation in feeding habits has been largely described as a common mechanism to allow the coexistence of several competing marine predators. However, little is known about the feeding ecology of most species of chondrichthyans, which play a pivotal role in the structure of marine food webs worldwide. In this study, we examined the trophic ecology of 3 relatively abundant chondrichthyans coexisting in the Mediterranean Sea: the blackmouth catshark Galeus melastomus, the velvet belly lanternshark Etmopterus spinax and the rabbit fish Chimaera monstrosa. To examine their trophic ecology and interspecific differences in food habits, we combined the analysis of stomach content and stable isotopes. Our results highlighted a trophic segregation between C. monstrosa and the other 2 species. G. melastomus showed a diet composed mainly of cephalopods, while E. spinax preyed mainly on shrimps and C. monstrosa on crabs. Interspecific differences in the trophic niche were likely due to different feeding capabilities and body size. Each species showed different isotopic niche space and trophic level. Specifically, C. monstrosa showed a higher trophic level than E. spinax and G. melastomus. The high trophic levels of the 3 species highlighted their important role as predators in the marine food web. Our results illustrate the utility of using complementary approaches that provide information about the feeding behaviour at short (stomach content) and long-term scales (stable isotopes), which could allow more efficient monitoring of marine food-web changes in the study area.
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Avadi, A., et al. "Comparative environmental performance of artisanal and commercial feed use in Peruvian freshwater aquaculture." Aquaculture. 435 (2015): 52–66.
Résumé: We used Life Cycle Assessment (LCA) to evaluate some of the environmental implications of using commercial versus artisanal feeds in Peruvian freshwater aquaculture of trout (Oncorhynchus mykiss), tilapia (Oreochromis spp.) and black pacu (Colossoma macropomum). Several scenarios believed to be representative of current Peruvian aquaculture practices were modelled, namely: production of trout in Andean lake cages; and culture of black pacu and tilapia in Amazonian and coastal lowland ponds, respectively. In general, Peruvian aquaculture is characterised by low technological intensity practices. Use of commercial aquafeeds is widespread, but artisanal feeds are frequently used in certain small-scale farms. We found that trout feeds feature higher environmental burdens than do black pacu and tilapia feeds. A similar trend is observed for production of these species. Across species, the substitution of artisanal with commercial feeds, despite improving feed conversion ratios in all cases, does not always reduce overall environmental impacts. This is due to the additional energy use and transportation requirements associated with commercial feed inputs. The substitution of artisanal feeds with commercial ones generally increases environmental impacts of the fish farming systems for the specific feeds considered, despite enhanced FCRs and economies of scale. This is due to the higher environmental impacts associated to certain feed inputs used in commercial feeds, in particular highly refined feed inputs. Consequently, in light of the importance of feeds to overall life cycle impacts of aquaculture production, the Peruvian aquafeed industry should preferentially source less refined and, in general, less environmentally burdened feed inputs (e. g. Bolivian soybean products over Brazilian, high quality over lower quality fishmeal, avoiding protein concentrates, etc.), to the extent that fish farming performance (i.e. feed conversion efficiency and cost structure) is not strongly affected. Among species, black pacu aquaculture shows the best environmental performance.
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Coll, M., et al. "Modelling dynamic ecosystems: venturing beyond boundaries with the Ecopath approach." Rev Fish Biol Fisheries. 25.2 (2015): 413–424.
Résumé: Thirty years of progress using the Ecopath with Ecosim (EwE) approach in different fields such as ecosystem impacts of fishing and climate change, emergent ecosystem dynamics, ecosystem-based management, and marine conservation and spatial planning were showcased November 2014 at the conference “Ecopath 30 years-modelling dynamic ecosystems: beyond boundaries with EwE”. Exciting new developments include temporal-spatial and end-to-end modelling, as well as novel applications to environmental impact analyses, in both aquatic and terrestrial domains. A wide range of plug-ins have been added to extend the diagnostic capabilities of EwE, and the scientific community is applying EwE to a diversified range of topics besides fishing impact assessments, such as the development of scientific advice for management, the analysis of conservation issues, and the evaluation of cumulative impacts of environmental and human activities in marine food webs (including habitat modification and the invasion of alien species). Especially promising is the new potential to include the EwE model in integrated assessments with other models such as those related to climate change research. However, there are still many challenges, including the communication of scientific results in management procedures. In addition, other important scientific issues are how to improve model result validation and perform model quality control. During the conference, the Ecopath International Research and Development Consortium was presented as a way for the EwE user community to become involved in the long-term sustainability of the EwE approach. Overall, exciting times are facing the ecosystem modelling scientific community, and as illustrated by the conference: synergistic cooperation is the future path for the EwE approach.
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Corrales, X., et al. "Ecosystem structure and fishing impacts in the northwestern Mediterranean Sea using a food web model within a comparative approach." Journal of Marine Systems. 148 (2015): 183–199.
Résumé: We developed an ecological model to characterize the structure and functioning of the marine continental shelf and slope area of the northwestern Mediterranean Sea, from Toulon to Cape La Nao (NWM model), in the early 2000s. The model included previously modeled areas in the NW Mediterranean (the Gulf of Lions and the Southern Catalan Sea) and expanded their ranges, covering 45,547 km2, with depths from 0 to 1000 m. The study area was chosen to specifically account for the connectivity between the areas and shared fish stocks and fleets. Input data were based on local scientific surveys and fishing statistics, published data on stomach content analyses, and the application of empirical equations to estimate consumption and production rates. The model was composed of 54 functional groups, from primary producers to top predators, and Spanish and French fishing fleets were considered. Results were analyzed using ecological indicators and compared with outputs from ecosystem models developed in the Mediterranean Sea and the Gulf of Cadiz prior to this study. Results showed that the main trophic flows were associated with detritus, phytoplankton, zooplankton and benthic invertebrates. Several high trophic level organisms (such as dolphins, benthopelagic cephalopods, large demersal fishes from the continental shelf, and other large pelagic fishes), and the herbivorous salema fish, were identified as keystone groups within the ecosystem. Results confirmed that fishing impact was high and widespread throughout the food web. The comparative approach highlighted that, despite productivity differences, the ecosystems shared common features in structure and functioning traits such as the important role of detritus, the dominance of the pelagic fraction in terms of flows and the importance of benthic–pelagic coupling.
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Halouani, G., et al. "Fishing impact in Mediterranean ecosystems: an EcoTroph modeling approach." Journal of Marine Systems. 150 (2015): 22–33.
Résumé: The EcoTroph modeling approach was applied to five Mediterranean marine ecosystems to characterize their food webs and investigate their responses to several simulated fishing scenarios. First, EcoTroph was used to synthesize the outputs of five pre-existing heterogeneous Ecopath models in a common framework, and thus to compare different ecosystems through their trophic spectra of biomass, catch, and fishing mortalities. This approach contributes to our understanding of ecosystem functioning, from both ecological and fisheries perspectives. Then, we assessed the sensitivity of each ecosystem to fishery, using EcoTroph simulations. For the five ecosystems considered, we simulated the effects of increasing or decreasing fishing mortalities on both the biomass and the catch per trophic class. Our results emphasize that the Mediterranean Sea is strongly affected by the depletion of high trophic level organisms. Results also show that fisheries impacts, at the trophic level scale, differ between ecosystems according to their trophic structure and exploitation patterns. A top-down compensation effect is observed in some simulations where a fishing-induced decrease in the biomass of predators impacts their prey, leading to an increase in the biomass at lower trophic levels. The results of this comparative analysis highlight that ecosystems where top-down controls are observed are less sensitive to variations in fishing mortality in terms of total ecosystem biomass. This suggests that the magnitude of top-down control present in a system can affect its stability.
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KLEISNER, K. M., et al. "Evaluating changes in marine communities that provide ecosystem services through comparative assessments of community indicators." Ecosystem Services. 16 (2015): 413–429.
Résumé: Fisheries provide critical provisioning services, especially given increasing human population. Understanding where marine communities are declining provides an indication of ecosystems of concern and highlights potential conflicts between seafood provisioning from wild fisheries and other ecosystem services. Here we use the nonparametric statistic, Kendall׳s tau, to assess trends in biomass of exploited marine species across a range of ecosystems. The proportion of ‘Non-Declining Exploited Species’ (NDES) is compared among ecosystems and to three community-level indicators that provide a gauge of the ability of a marine ecosystem to function both in provisioning and as a regulating service: survey-based mean trophic level, proportion of predatory fish, and mean life span. In some ecosystems, NDES corresponds to states and temporal trajectories of the community indicators, indicating deteriorating conditions in both the exploited community and in the overall community. However differences illustrate the necessity of using multiple ecological indicators to reflect the state of the ecosystem. For each ecosystem, we discuss patterns in NDES with respect to the community-level indicators and present results in the context of ecosystem-specific drivers. We conclude that using NDES requires context-specific supporting information in order to provide guidance within a management framework.
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Langlois, J., et al. "Sea use impact category in life cycle assessment : characterization factors for life support functions." International Journal of Life Cycle Assessment. 20.7 (2015): 970–981.
Résumé: The impact of human activities on marine environments is poorly addressed by the scope of life cycle impact assessment (LCIA). The aim of this study is to provide characterization factors to assess impacts of sea use such as fishing activities or seafloor destruction and transformation on the life support functions of marine ecosystems. The consensual framework of land use for ecosystem services damage potential assessment was applied, according to the recent United Nations Environment Programme-Society for Environmental Toxicology and Chemistry (UNEP-SETAC) guidelines, using the free net primary production as a quality index of life support functions. The impact of shading, biomass removal, seafloor destruction, and artificial habitat creation on the available quantity of organic biomass for the ecosystem functioning was quantified at the midpoint level with a common unit (kg of organic carbon equivalent). It included effects of human interventions on both the ecosystem production potential and the stock of biomass present within the ecosystem. Characterization factors (CF) for biomass removal vary from 0.1 kg(Ceq) kg(-1) for seaweed to 111.1 kg(Ceq) kg(-1) for tunas, bonitos, and billfishes. CF for seafloor destruction range from 0.164 kg(Ceq) m(-2) for a temperate seagrass ecosystem to 0.342 kg(Ceq) m(-2) for an intertidal tropical rocky habitat. This study provides an operational method in order to compute sea use impact assessment.
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Valls, A., M. Coll, and V. Christensen. "Keystone species : toward an operational concept for marine biodiversity conservation." Ecological Monographs. 85.1 (2015): 29–47.
Résumé: Various definitions and indices have been proposed in the literature to identify keystone species. In this study, we intended to make the concept of keystone species operational for marine biodiversity conservation. We used an exclusive definition of keystone species, based on the original concept of keystone predator, and derived a new functional index of keystoneness (KS) from an ecosystem-modeling approach. First, several KS indices were formulated, by combining measures of the mixed-trophic impact (MTI) and biomass of species. Then, a meta-analysis was performed, based on 101 published Ecopath food-web models, selected with a scoring method, and representative of the variety of marine ecosystems worldwide. The indices were applied to the models, and two statistical methods were compared to select the most promising KS index. Rank correlation tests were performed to assess the balance between the contribution of the impact and biomass components to the different KS indices. In addition, a classification tree was implemented, based on ecosystem-specific thresholds applied to the latter species traits, and used to confirm the identified keystone species. The selected index obtained the highest number of models with positive results from both the rank correlation tests and the classification tree. We also demonstrated the limitations of existing KS indices previously applied in the literature. Species were ranked according to their estimates of keystoneness with the selected KS index, so that potential keystone species were quantitatively identified in the 101 modeled food webs. The standardized modeling approach allowed for a comparison of the identified keystone species across models: cartilaginous fishes and toothed whales obtained the highest occurrences. Finally, the selected KS index was applied to the well-known case study of Prince William Sound (Alaska, USA). Potentially significant anthropogenic (fishing) impacts on keystone species were also considered and discussed. The operational methodology presented is directly applicable to marine food webs, and may be adapted to other (freshwater or terrestrial) systems.
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2014 |
Bourjea, J., et al. "Marine turtle interaction with purse-seine fishery in the Atlantic and Indian oceans: Lessons for management." Biological Conservation. 178 (2014): 74–87.
Résumé: Bycatch of endangered marine turtles is a growing issue for the management of all fisheries, including the oceanic purse-seine fishery. The aim of this study was to assess the spatial and temporal variation in bycatch rates of these species in the entire European purse-seine fishery operating in the Atlantic and Indian oceans. The study was based on data collected through observer programs from 1995 to 2011. During that period, a total of 15 913 fishing sets were observed, including 6 515 on Drifting Fish Aggregating Devices (DFADs) and 9 398 on free swimming schools, representing a global coverage of 10.3% and 5.1% of the total fishing activity in the Atlantic and Indian Ocean, respectively. Moreover, from 2003 to 2011, 14 124 specific observations were carried out on DFADs to check turtle entanglement in the net covering DFADs. We found that the purse-seine fishery has a very low impact on marine turtles. We estimated that the annual number of individuals incidentally captured was 218 (SD = 150) and 250 (SD = 157) in the Atlantic and Indian Ocean, respectively, with more than 75% being released alive. The present study also investigated the impact of DFADs; which is considered a key conservation issue for this fishery. Drifting objects may play a key role in aggregating juveniles of marine turtles, implying the need for improving their construction to avoid entanglement (e.g. avoiding nets in the structure); however, based on our study it is not the main source of incidental captures of marine turtles in this fishery.
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Colléter, M., et al. "Fishing inside or outside? A case studies analysis of potential spillover effect from marine protected areas, using food web models." Journal of Marine Systems. 139 (2014): 383–395.
Résumé: Marine protected areas (MPAs) are implemented worldwide as an efficient tool to preserve biodiversity and protect ecosystems. We used food web models (Ecopath and EcoTroph) to assess the ability of MPAs to reduce fishing impacts on targeted resources and to provide biomass exports for adjacent fisheries. Three coastal MPAs: Bonifacio and Port-Cros (Mediterranean Sea), and Bamboung (Senegalese coast), were used as case studies. Pre-existing related Ecopath models were homogenized and ecosystem characteristics were compared based on network indices and trophic spectra analyses. Using the EcoTroph model, we simulated different fishing mortality scenarios and assessed fishing impacts on the three ecosystems. Lastly, the potential biomass that could be exported from each MPA was estimated. Despite structural and functional trophic differences, the three MPAs showed similar patterns of resistance to simulated fishing mortalities, with the Bonifacio case study exhibiting the highest potential catches and a slightly inferior resistance to fishing. We also show that the potential exports from our small size MPAs are limited and thus may only benefit local fishing activities. Based on simulations, their potential exports were estimated to be at the same order of magnitude as the amount of catch that could have been obtained inside the reserve. In Port Cros, the ban of fishing inside MPA could actually allow for improved catch yields outside the MPA due to biomass exports. This was not the case for the Bonifacio site, as its potential exports were too low to offset catch losses. This insight suggests the need for MPA networks and/or sufficiently large MPAs to effectively protect juveniles and adults and provide important exports. Finally, we discuss the effects of MPAs on fisheries that were not considered in food web models, and conclude by suggesting possible improvements in the analysis of MPA efficiency.
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Freon, P., et al. "Life cycle assessment of the Peruvian industrial anchoveta fleet : boundary setting in life cycle inventory analyses of complex and plural means of production." International Journal of Life Cycle Assessment. 19.5 (2014): 1068–1086.
Résumé: This work has two major objectives: (1) to perform an attributional life cycle assessment (LCA) of a complex mean of production, the main Peruvian fishery targeting anchoveta (anchovy) and (2) to assess common assumptions regarding the exclusion of items from the life cycle inventory (LCI). Data were compiled for 136 vessels of the 661 units in the fleet. The functional unit was 1 t of fresh fish delivered by a steel vessel. Our approach consisted of four steps: (1) a stratified sampling scheme based on a typology of the fleet, (2) a large and very detailed inventory on small representative samples with very limited exclusion based on conventional LCI approaches, (3) an impact assessment on this detailed LCI, followed by a boundary-refining process consisting of retention of items that contributed to the first 95 % of total impacts and (4) increasing the initial sample with a limited number of items, according to the results of (3). The life cycle impact assessment (LCIA) method mostly used was ReCiPe v1.07 associated to the ecoinvent database. Some items that are usually ignored in an LCI's means of production have a significant impact. The use phase is the most important in terms of impacts (66 %), and within that phase, fuel consumption is the leading inventory item contributing to impacts (99 %). Provision of metals (with special attention to electric wiring which is often overlooked) during construction and maintenance, and of nylon for fishing nets, follows. The anchoveta fishery is shown to display the lowest fuel use intensity worldwide. Boundary setting is crucial to avoid underestimation of environmental impacts of complex means of production. The construction, maintenance and EOL stages of the life cycle of fishing vessels have here a substantial environmental impact. Recommendations can be made to decrease the environmental impact of the fleet.
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Valladares, F., et al. "The effects of phenotypic plasticity and local adaptation on forecasts of species range shifts under climate change." Ecology Letters. 17.11 (2014): 1351–1364.
Résumé: Species are the unit of analysis in many global change and conservation biology studies; however, species are not uniform entities but are composed of different, sometimes locally adapted, populations differing in plasticity. We examined how intraspecific variation in thermal niches and phenotypic plasticity will affect species distributions in a warming climate. We first developed a conceptual model linking plasticity and niche breadth, providing five alternative intraspecific scenarios that are consistent with existing literature. Secondly, we used ecological niche-modeling techniques to quantify the impact of each intraspecific scenario on the distribution of a virtual species across a geographically realistic setting. Finally, we performed an analogous modeling exercise using real data on the climatic niches of different tree provenances. We show that when population differentiation is accounted for and dispersal is restricted, forecasts of species range shifts under climate change are even more pessimistic than those using the conventional assumption of homogeneously high plasticity across a species' range. Suitable population-level data are not available for most species so identifying general patterns of population differentiation could fill this gap. However, the literature review revealed contrasting patterns among species, urging greater levels of integration among empirical, modeling and theoretical research on intraspecific phenotypic variation.
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2013 |
BANARU, D., et al. "Trophic structure in the Gulf of Lions marine ecosystem (north-western Mediterranean Sea) and fishing impacts." Journal Of Marine Systems. 111 (2013): 45–68.
Résumé: The Gulf of Lions ecosystemwas described using the Ecopath mass-balancemodel to characterise its structure and functioning and to examine the effects of themultispecific fisheries operating in this area. The model is composed of 40 compartments, including 1 group of seabirds, 2 groups of etaceans, 18 groups of fish, 12 groups of invertebrates, 5 groups of primary producers, detritus and discards. Input datawere based on several recurrent scientific surveys, two alternative datasets for fishing data, stock assessment outputs, stomach content analyses and published information. Results showed that the functional groups were organised into five trophic levels with the highest one represented by dolphins, anglerfish, Atlantic bluefin tuna, European hake and European conger. European pilchard and European anchovy dominated in terms of fish biomass and catch. Other fish with high biomass such as Atlantic mackerel and blue whiting were highly important in the food web. Seabirds, dolphins and cuttlefish–squids represented keystone species. Important coupled pelagic–demersal–benthic interactions were described. The 7 different fisheries analysed were operating at mean trophic levels situated between 2.6 for small artisanal boats, and 4.1 for purse seines (>24 m) targeting large pelagic fish, indicating an intensively exploited ecosystem. Large trawlers (24–40 m) had the highest impact on most of the groups considered; while purse seines (12–24 m) targeting small pelagic fish had the lowest impact. Preliminary results highlighted the importance of data sources for further ecosystem and fisheries analyses and management scenarios.
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Capello, M., et al. "Effet of current and daylight variations on small-pelagic fish aggregations (Selar crumenophthalmus) around a coastal fish aggregating device studied by fine-scale acoustic tracking." Aquatic Living Resources. 26 (2013): 63–68.
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De Wit, R., et al. "Conservation of a permanent hypersaline lake: management options evaluated from decadal variability of Coleofasciculus chthonoplastes microbial mats." Aquatic Conservation-Marine and Freshwater Ecosystems. 23.4 (2013): 532–545.
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Gravel, D., et al. "Inferring food web structure from predator-prey body size relationships." Methods in Ecology and Evolution. 4.11 (2013): 1083–1090.
Résumé: 1. Current global changes make it important to be able to predict which interactions will occur in the emerging ecosystems. Most of the current methods to infer the existence of interactions between two species require a good knowledge of their behaviour or a direct observation of interactions. In this paper, we overcome these limitations by developing a method, inspired from the niche model of food web structure, using the statistical relationship between predator and prey body size to infer the matrix of potential interactions among a pool of species. 2. The novelty of our approach is to infer, for any species of a given species pool, the three species-specific parameters of the niche model. The method applies to both local and metaweb scales. It allows one to evaluate the feeding interactions of a new species entering the community. 3. We find that this method gives robust predictions of the structure of food webs and that its efficiency is increased when the strength of the body-size relationship between predators and preys increases. 4. We finally illustrate the potential of the method to infer the metaweb structure of pelagic fishes of the Mediterranean sea under different global change scenarios.
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Rossi, F., et al. "Complex Effects of Ecosystem Engineer Loss on Benthic Ecosystem Response to Detrital Macroalgae." PLoS One. 8.6 (2013).
Résumé: Ecosystem engineers change abiotic conditions, community assembly and ecosystem functioning. Consequently, their loss may modify thresholds of ecosystem response to disturbance and undermine ecosystem stability. This study investigates how loss of the bioturbating lugworm Arenicola marina modifies the response to macroalgal detrital enrichment of sediment biogeochemical properties, microphytobenthos and macrofauna assemblages. A field manipulative experiment was done on an intertidal sandflat (Oosterschelde estuary, The Netherlands). Lugworms were deliberately excluded from 1x m sediment plots and different amounts of detrital Ulva (0, 200 or 600 g Wet Weight) were added twice. Sediment biogeochemistry changes were evaluated through benthic respiration, sediment organic carbon content and porewater inorganic carbon as well as detrital macroalgae remaining in the sediment one month after enrichment. Microalgal biomass and macrofauna composition were measured at the same time. Macroalgal carbon mineralization and transfer to the benthic consumers were also investigated during decomposition at low enrichment level (200 g WW). The interaction between lugworm exclusion and detrital enrichment did not modify sediment organic carbon or benthic respiration. Weak but significant changes were instead found for porewater inorganic carbon and microalgal biomass. Lugworm exclusion caused an increase of porewater carbon and a decrease of microalgal biomass, while detrital enrichment drove these values back to values typical of lugworm-dominated sediments. Lugworm exclusion also decreased the amount of macroalgae remaining into the sediment and accelerated detrital carbon mineralization and CO2 release to the water column. Eventually, the interaction between lugworm exclusion and detrital enrichment affected macrofauna abundance and diversity, which collapsed at high level of enrichment only when the lugworms were present. This study reveals that in nature the role of this ecosystem engineer may be variable and sometimes have no or even negative effects on stability, conversely to what it should be expected based on current research knowledge.
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2012 |
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Dueri, S., B. Faugeras, and O. Maury. "Modelling the skipjack tuna dynamics in the Indian Ocean with APECOSM6E : part 1. Model formulation." Ecological Modelling. 245 (2012): 41–54.
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Gasche, L., et al. "Global assessment of the fishing impacts on the Southern Benguela ecosystem using an EcoTroph modelling approach." Journal of Marine Systems. 90.1 (2012): 1–12.
Résumé: We show that the EcoTroph model based on trophic spectra is an efficient tool to build ecosystem diagnoses of the impact of fishing. Using the Southern Benguela case study as a pretext, we present the first thorough application of the model to a real ecosystem. We thus review the structure and functioning of EcoTroph and we introduce the user to the steps that should be followed, showing the various possibilities of the model while underlining the most critical points of the modelling process. We show that EcoTroph provides an overview of the current exploitation level and target factors at the ecosystem scale, using two distinct trophic spectra to quantify the fishing targets and the fishing impact per trophic level. Then, we simulate changes in the fishing mortality, facilitating differential responses of two groups of species within the Southern Benguela ecosystem to be distinguished. More generally, we highlight various trends in a number of indicators of the ecosystem's state when increasing fishing mortality and we show that this ecosystem is moderately exploited, although predatory species are at their MSY. Finally, trophic spectra of the fishing effort multipliers EMSY and E(0.1) are proposed as tools for monitoring the ecosystem effects of fishing.
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Lassalle, G., et al. "An ecosystem approach for the assessment of fisheries impacts on marine top predators : the Bay of Biscay case study." Ices Journal of Marine Science. 69.6 (2012): 925–938.
Résumé: A number of marine mammal populations is currently threatened by their interactions with fisheries. The present study aimed to provide insights into the severity of potential impacts of operational and biological interactions between top predators and fisheries, in the Bay of Biscay region. Our approach was to modify an Ecopath with Ecosim (EwE) model describing the overall structure and function of the ecosystem by including landings and discards of exploited stocks and estimations of the bycatch of non-target compartments. Second, a set of ecological indices and a trophic level (TL)-based model (EcoTroph, ET) were derived from the EwE model. ET was used to simulate the effects of increasing fishing pressure on the ecosystem and, more particularly, on top predators. The Bay of Biscay was demonstrated to be not far from overexploitation at the current fishing rate, this phenomenon being particularly noticeable for the highest TLs. Within the toothed cetacean community, bottlenose dolphins appeared the most sensitive to resource depletion, whereas common dolphins and harbour porpoises were most impacted by their incidental captures in fishing gears. This study provides a methodological framework to assess the impacts of fisheries on ecosystems for which EwE, or other ecosystem models, already exist.
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2011 |
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Arrizabalaga, H., et al. "Productivity and susceptibility analysis for species caught in Atlantic tuna fisheries." Aquatic Living Resources. 24 (2011): 1–12.
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Brochier, T., C. Lett, and P. Freon. "Investigating the “northern Humboldt paradox” from model comparisons of small pelagic reproductive strategies in eastern boundary upwelling ecosystems." Fish and Fisheries (2011): 94–109.
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Jacquemet, S., M. Potier, and F. Ménard. "Do drifting and anchored fish aggregating devices (FADs) similarly influence tuna feeding habits ? : a case study from the western Indian Ocean." Fisheries Research. 107 (2011): 283–290.
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2010 |
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Ecoutin, J. - M., et al. "Changes over a decade in fish assemblages exposed to both environmental and fishing constraints in the Sine Saloum estuary (Senegal)." Estuarine, Coastal and Shelf Science. 87 (2010): 284–292.
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Freon, P., et al. "A review and tests of hypotheses about causes of the KwaZulu-Natal sardine run." African Journal of Marine Science. 32.2 (2010): 449–479.
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Martins, C. I. M., et al. "New developments in recirculating aquaculture systems in Europe: A perspective on environmental sustainability." Aquacultural Engineering. 43.3 (2010): 83–93.
Résumé: The dual objective of sustainable aquaculture, i.e., to produce food while sustaining natural resources is achieved only when production systems with a minimum ecological impact are used. Recirculating aquaculture systems (RASs) provide opportunities to reduce water usage and to improve waste management and nutrient recycling. RAS makes intensive fish production compatible with environmental sustainability. This review aims to summarize the most recent developments within RAS that have contributed to the environmental sustainability of the European aquaculture sector. The review first shows the ongoing expansion of RAS production by species and country in Europe. Life cycle analysis showed that feed, fish production and waste and energy are the principal components explaining the ecological impact of RAS. Ongoing developments in RAS show two trends focusing on: (1) technical improvements within the recirculation loop and (2) recycling of nutrients through integrated farming. Both trends contributed to improvements in the environmental sustainability of RAS. Developments within the recirculation loop that are reviewed are the introduction of denitrification reactors, sludge thickening technologies and the use of ozone. New approached towards integrated systems include the incorporation of wetlands and algal controlled systems in RAS. Finally, the review identifies the key research priorities that will contribute to the future reduction of the ecological impact of RAS. Possible future breakthroughs in the fields of waste production and removal might further enhance the sustainabilty of fish production in RAS. (C) 2010 Elsevier B.V. All rights reserved.
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Shannon, L. J., et al. "Comparing data-based indicators across upwelling and comparable systems for communicating ecosystem states and trends." ICES J. Mar. Sci.. 67.4 (2010): 807–832.
Résumé: Shannon, L. J., Coll, M., Yemane, D., Jouffre, D., Neira, S., Bertrand, A., Diaz, E., and Shin, Y-J. 2010. Comparing data-based indicators across upwelling and comparable systems for communicating ecosystem states and trends. – ICES Journal of Marine Science, 67: 807-832.
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Shin, Y. - J., and L. J. Shannon. "Using indicators for evaluating, comparing, and communicating the ecological status of exploited marine ecosystems. 1. The IndiSeas project." Ices Journal of Marine Science. 67 (2010): 686–691.
Résumé: One of the challenges faced by the scientific community grappling with the ecosystem approach to fisheries is to propose a generic set of synthetic ecological indicators, which would accurately reflect the effects of fisheries on marine ecosystems, and could support sound communication and management practices. The IndiSeas Working Group was established in 2005 under the auspices of the Eur-Oceans Network of Excellence to develop methods to provide indicators-based assessments of the status of exploited marine ecosystems in a comparative framework. Here, we present the two main outputs of the first phase of the project: a suite of papers documenting a combination of indicator-based methods and results comparing the ecological status of the world's exploited marine ecosystems, and a website aiming to communicate these results beyond scientific audiences.
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