Résumé: Questions Forest fragmentation affects biodiversity locally (alpha diversity) and beyond – at relatively larger scales (gamma diversity) – by increasing dispersal and recruitment limitations. Yet, does an increase in fragmentation affect the relationship between alpha and gamma diversity and what can we learn from it? Location Northern France. Methods We surveyed 116 forest patches across three fragmentation levels: none (continuous forest); intermediate (forest patches connected by hedgerows); and high (isolated forest patches). Plant species richness of both forest specialists and generalists was surveyed at five nested spatial resolutions across each forest patch: 1 m(2); 10 m(2); 100 m(2); 1,000 m(2); and total forest patch area. First, we ran log-ratio models to quantify the alpha-gamma relationship. We did that separately for all possible combinations of fragmentation level (none vs intermediate vs high) x spatial scale (e.g., alpha-1 m(2) vs gamma-10 m(2)) x species type (e.g., alpha-specialists vs gamma-specialists). We then used linear mixed-effects models to analyze the effect of fragmentation level, spatial scale, species type and all two-way interaction terms on the slope coefficient extracted from all log-ratio models. Results We found an interaction effect between fragmentation level and species type, such that forest specialists shifted from a linear (i.e., proportional sampling) to a curvilinear plateau (i.e., community saturation) relationship at low and high fragmentation, respectively, while generalists shifted from a curvilinear to a linear pattern. Conclusions The impact of forest fragmentation on the alpha-gamma relationship supports generalist species persistence over forest specialists, with contrasting mechanisms for these two guilds. As fragmentation increases, forest specialists shift from proportional sampling towards community saturation, thus reducing alpha diversity likely due to dispersal limitation. Contrariwise, generalists shift from community saturation towards proportional sampling, thus increasing alpha diversity likely due to an increase in the edge:core ratio. To ensure long-term conservation of forest specialists, one single large forest patch should be preferred over several small ones.

Résumé: We investigated the habitat utilization, vertical and horizontal behaviour of Atlantic bluefin tuna Thunnus thynnus (ABFT) in relation to oceanographic conditions in the northwestern Mediterranean Sea, based on 36 pop-up archival tags and different environmental data sets. Tags were deployed on early mature ABFT (127–255cm) between July and November in 2007-2014, on the shelf area off Marseille, France. The data obtained from these tags provided 1643 daily summaries of ABFT vertical behaviour over 8years of tag deployment. Based on a hierarchical clustering of this data, we could identify four principle daily vertical behaviour types, representing surface (≦10m) and subsurface (10–100m) orientation, moderate (50–200m) and deep (≧200m) diving behaviour. These vertical behaviour types showed seasonal variations with partly opposing trends in their frequencies. Accordingly, ABFT were more surface orientated during summer, while moderate diving behaviour was more common during winter. Depth time series data further revealed inverted day-night patterns for both of these periods. Tagged ABFT frequented the surface waters more regularly during daytime and deeper waters during the night in summer, while the opposite pattern was found in winter. Seasonal changes in the vertical behaviour of ABFT were accompanied by simultaneous changes in environmental conditions (SST, chla, thermal stratification). Accordingly, surface orientation and moderate diving behaviour appeared to be triggered by the thermal stratification of the water column, though less pronounced than previously reported for ABFT in the North Atlantic, probably indicating adaptive vertical behaviour related to the availability of epipelagic food resources (anchovies and sardines). Deep diving behaviour was particularly frequent during months of high biological productivity (February-May), although one recovered tag showed periodic and unusual long spike dives during summer-autumn, in relation to thermal fronts. Regional effects on the vertical behaviour of ABFT were identified through GAMs, with surface orientation being particularly pronounced in the Gulf of Lions, highlighting its suitability for an ongoing annual aerial survey program to estimate ABFT abundance in this region. In addition, increased levels of mesoscale activity/productivity (e.g. related to oceanic fronts) were detected in an area regularly utilized by ABFT, south of the Gulf of Lions, underlining its attractiveness as foraging ground. Kernel densities of geolocation estimates showed a seasonal shift in the horizontal distribution of ABFT from this “high-use” area towards the Gulf of Lions during summer, probably linked to the enhanced availability of epipelagic food resources at this time.

Résumé: Ensemble niche modelling has become a common framework to predict changes in assemblages composition under climate change scenarios. The amount of uncertainty generated by the different components of this framework has rarely been assessed. In the marine realm forecasts have usually focused on taxa representing the top of the marine food-web, thus overlooking their basal component: the plankton. Calibrating environmental niche models at the global scale, we modelled the habitat suitability of 106 copepod species and estimated the dissimilarity between present and future zooplanktonic assemblages in the surface Mediterranean Sea. We identified the patterns (species replacement versus nestedness) driving the predicted dissimilarity, and quantified the relative contributions of different uncertainty sources: environmental niche models, greenhouse gas emission scenarios, circulation model configurations and species prevalence. Our results confirm that the choice of the niche modelling method is the greatest source of uncertainty in habitat suitability projections. Presence-only and presence-absence methods provided different visions of the niches, which subsequently lead to different future scenarios of biodiversity changes. Nestedness with decline in species richness is the pattern driving dissimilarity between present and future copepod assemblages. Our projections contrast with those reported for higher trophic levels, suggesting that different components of the pelagic food-web may respond discordantly to future climatic changes.