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Auguet, J. C., & Casamayor, E. O. (2008). A hotspot for cold crenarchaeota in the neuston of high mountain lakes. Environ Microbiol, 10(4), 1080–1086.
Résumé: We have surveyed the first 1 m of 10 oligotrophic high mountain lakes in the Central Pyrenees (Spain) for both abundance and predominant phylotypes richness of the archaeaplankton assemblage, using CARD-FISH and 16S rRNA gene sequencing respectively. Archaea inhabiting the air-water surface microlayer (neuston) ranged between 3% and 37% of total 4,6-diamidino-2-phenylindole (DAPI) counts and were mainly Crenarchaeota of a new freshwater cluster distantly related to the Marine Group 1.1a. Conversely, most of the Archaea from the underlying waters (the remaining first 1 m integrated) were mainly Euryarchaeota of three distantly related branches ranging between 0.4% and 27% of total DAPI counts. Therefore, a consistent qualitative and quantitative spatial segregation was observed for the two main archaeal phyla between neuston and underlying waters at a regional scale. We also observed a consistent pattern along the lakes surveyed between lake area, lake depth and water residence time, and the archaeal enrichment in the neuston: the larger the lake the higher the proportion of archaea in the neuston as compared with abundances from the underlying waters (n = 10 lakes; R(2) > 0.80; P < 0.001, in all three cases). This is the first report identifying a widespread non-thermophilic habitat where freshwater planktonic Crenarchaeota can be found naturally enriched. High mountain lakes offer great research opportunities to explore the ecology of one of the most enigmatic and far from being understood group of prokaryotes.
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Ben Othman, H., Leboulanger, C., Le Floc'h, E., Mabrouk, H. H., & Hlaili, A. S. (2012). Toxicity of benz(a)anthracene and fluoranthene to marine phytoplankton in culture: Does cell size really matter? J. Hazard. Mater., 243, 204–211.
Résumé: The toxicity of benz(a)anthracene and fluoranthene (polycyclic aromatic hydrocarbons, PAHs) was evaluated on seven species of marine algae in culture belonging to pico-, nano-, and microphytoplankton, exposed to increasing concentrations of up to 2 mg L-1. The short-term (24 h) toxicity was assessed using chlorophyll a fluorescence transients, linked to photosynthetic parameters. The maximum quantum yield Fv/Fm was lower at the highest concentrations tested and the toxicity thresholds were species-dependent. For acute effects, fluoranthene was more toxic than benz(a)anthracene, with LOECs of 50.6 and 186 mu g L-1, respectively. After 72 h exposure, there was a dose-dependent decrease in cell density, fluoranthene being more toxic than benz(a)anthracene. The population endpoint at 72 h was affected to a greater extent than the photosynthetic endpoint at 24 h. EC50 was evaluated using the Hill model, and species sensitivity was negatively correlated to cell biovolume. The largest species tested, the dinoflagellate Alexandrium catenella, was almost insensitive to either PAH. The population endpoint EC50s for fluoranthene varied from 54 mu g L-1 for the picophytoplankton Picochlorum sp. to 418 mu g L-1 for the larger diatom Chaetoceros muelleri. The size/sensitivity relationship is proposed as a useful model when there is a lack of ecotoxicological data on hazardous chemicals, especially in marine microorganisms. (C) 2012 Elsevier B.V. All rights reserved.
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Blanchet, M., Pringault, O., Panagiotopoulos, C., Lefevre, D., Charriere, B., Ghiglione, J. - F., et al. (2017). When riverine dissolved organic matter (DOM) meets labile DOM in coastal waters: changes in bacterial community activity and composition. Aquat. Sci., 79(1), 27–43.
Résumé: Heterotrophic bacterial communities in marine environments are exposed to a heterogeneous mixture of dissolved organic compounds with different bioreactivity that may control both their activity and composition. The coastal environment is an example of a mixing area where recalcitrant allochthonous organic matter from rivers can encounter labile organic matter from marine phytoplanktonic blooms. The objective of this study was to explore the effects of mixed qualities of dissolved organic matter (DOM) on bacterial community activity (BCA) and bacterial community composition (BCC) and to test for a priming effect when DOM sources are added in combination. Coastal marine bacterial communities were incubated separately with a mixture of amino acids and with natural riverine DOM or with both sources together for 42 days. Addition of amino acids alone or in combination with riverine DOM led to a similar stimulation of BCA compared to control condition, whereas addition of riverine DOM alone did not modify BCA compared to the control. On the contrary, BCC analyzed by 16S rRNA gene pyrosequencing was not affected by the addition of amino acids alone, but changed dramatically with riverine DOM alone or in combination with amino acids. Our results show that changes in BCA and BCC can be driven by different types of DOM, but that these changes are not necessarily coupled. Moreover, the addition of labile DOM did not modify the microbial decomposition of riverine DOM, nor the BCC, suggesting that a priming effect did not occur under these experimental conditions.
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Bourgeois, S., Hochard, S., & Pringault, O. (2010). Subtidal microphytobenthos: effects of inorganic and organic compound supplies on migration, production, and respiration in a tropical coastal environment. Aquat. Microb. Ecol., 61(1), 13–29.
Résumé: Microphytobenthos (MPB) is an important primary producer in coastal ecosystems. In oligotrophic environments, its activity may be controlled by the availability of organic or inorganic compounds but also by its migration behavior. The objective of this study was to determine, in MPB-colonized subtidal sediments, the consequences of short-term enrichments (< 24 h) of organic (alanine, glutamate, and glucose) and inorganic (ammonium, phosphate) compounds on MPB vertical migration and metabolisms, net production (NP), areal gross production (AGP), and community respiration (R). Two contrasting stations located in the southwest lagoon of New Caledonia were investigated: 1 under strong anthropogenic influence and 1 under more oceanic influence. Both stations were dominated by epipelic diatoms. Differences in net primary production were explained by diurnal variation of MPB biomass at the sediment surface, showing the importance of MPB migration in the functioning of these subtidal environments. However, a stimulation or inhibition of MPB migration did not necessarily impact the net primary production of the system; this strongly depends upon the interactions between the autotrophic and heterotrophic compartments, the latter being controlled by the environmental conditions. For the station under low anthropogenic influence, AGP and R were both significantly stimulated by alanine, glucose, and ammonium, and significantly inhibited by phosphate. The similar responses of AGP and R to enrichments suggest that autotrophs and heterotrophs were tightly coupled. Conversely, in the station under strong anthropogenic influence, AGP and R responded differently. Addition of ammonium inhibited AGP without having an impact on R, whereas addition of phosphate inhibited R whilst having no measurable effect on AGP. In this station, the coupling between autotrophs and heterotrophs was weakened, suggesting that the carbon demand of the heterotrophic compartment is probably sustained by the supplies of allochthonous organic matter rather than by exudates from the autotrophic compartment.
Mots-Clés: Amino acids; Autotroph-heterotroph coupling; Glucose; Nutrients; Oxygen; Reflectance; availability; benthic diatoms; chlorophyll-a fluorescence; coral-reef lagoon; headwater streams; hypersaline microbial mat; lagoon; marine; microelectrode; new-caledonia; nutrient; oxygenic photosynthesis; phytoplankton
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Garrido, M., Cecchi, P., Vaquer, A., & Pasqualini, V. (2013). Effects of sample conservation on assessments of the photosynthetic efficiency of phytoplankton using PAM fluorometry. Deep-Sea Res. Part I-Oceanogr. Res. Pap., 71, 38–48.
Résumé: Pulse Amplitude Modulated (PAM) fluorometry is now a widely used method for the assessment of phytoplankton fitness, with an increasing popularity in field assessments. It is usually recommended to carry out measurements swiftly after collection, but the number of samples and analytical procedures needed to obtain valuable datasets sometimes makes immediate analysis impracticable, forcing delays between fluorescence measurements. Conservation conditions of samples before analysis may potentially affect their photosynthetic performances but no formal study documenting such impacts appears available in the literature. The aim of this study was to investigate the effects of storage conditions (temperature, duration) on photosynthetic parameters in different phytoplankton communities (characterized in situ by a BBE fluoroprobe) sampled during summer in different environmental locations in a Mediterranean lagoon (Biguglia lagoon, Corsica, France). PAM-fluorescence parameters were measured after three different conservation durations (2-4 h, 6-8 h and 10-12 h after collection) on samples stored at three different temperatures (15 degrees C, 25 degrees C and 35 degrees C). Results showed that storage at the highest temperature severely impacted photosynthetic parameters, with cumulative effects as storage duration increased. For phytoplankton samples collected in warm or tropical environments, storage at “room temperature” (25 degrees C) only appeared a valid option if measurements have to be carried out strictly within a very short delay. Inversely, cooling the samples (i.e. conservation at 15 degrees C) did not induce significant effects, independently of storage duration. Cooling appeared the best solution when sampling-to-analysis delay goes over a few hours. Long-term storage ( > 8 h) should definitively be avoided. (C) 2012 Elsevier Ltd. All rights reserved.
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