2019

Hickman-Lewis, K., et al. "Mechanistic morphogenesis of organo-sedimentary structures growing under geochemically stressed conditions: Keystone to proving the biogenicity of some archaean stromatolites?" Geosciences. 9.8 (2019): 359.
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2018

Compte-Port, S., et al. "Metal contaminations impact archaeal community composition, abundance and function in remote alpine lakes." Environ. Microbiol.. 20.7 (2018): 2422–2437.
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Hugoni, M., et al. "Spatiotemporal variations in microbial diversity across the three domains of life in a tropical thalassohaline lake (Dziani Dzaha, Mayotte Island)." Molecular Ecology. 27.23 (2018): 4775–4786.
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Restrepo-Ortiz, C. X., et al. "Development of a 16S rRNA-targeted fluorescence in situ hybridization probe for quantification of the ammonia-oxidizer Nitrosotalea devanaterra and its relatives." Syst. Appl. Microbiol.. 41.4 (2018): 408–413.
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2016

Jeanbille, M., et al. "Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments." Front. Microbiol.. 7 (2016): Unsp-1303.
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2011

Auguet, J. C., et al. "Seasonal changes of freshwater ammonia-oxidizing archaeal assemblages and nitrogen species in oligotrophic alpine lakes." Appl Environ Microbiol. 77.6 (2011): 1937–1945.
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2010

Auguet, J. C., A. Barberan, and E. O. Casamayor. "Global ecological patterns in uncultured Archaea." Isme J. 4.2 (2010): 182–190.
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Lliros, M., et al. "Vertical distribution of ammonia-oxidizing crenarchaeota and methanogens in the epipelagic waters of Lake Kivu (Rwanda-Democratic Republic of the Congo)." Appl Environ Microbiol. 76.20 (2010): 6853–6863.
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2008

Auguet, J. C., and E. O. Casamayor. "A hotspot for cold crenarchaeota in the neuston of high mountain lakes." Environ Microbiol. 10.4 (2008): 1080–1086.
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Auguet, J. C., et al. "Fingerprinting the genetic diversity of the biotin carboxylase gene (accC) in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark." Environ Microbiol. 10.10 (2008): 2527–2536.
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