2018

Bettarel, Y., et al. "Hordes of Phages in the Gut of the Tilapia Sarotherodon melanotheron." Sci Rep. 8 (2018): 11311.
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Bettarel, Y., et al. "Corallivory and the microbial debacle in two branching scleractinians." Isme J.. 12.4 (2018): 1109–1126.
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de Lorgeril, J., et al. "Immune-suppression by OsHV-1 viral infection causes fatal bacteraemia in Pacific oysters." Nat. Commun.. 9 (2018): 4215.
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Ram, P. A. S., et al. "Bacterial-viral interactions in the sea surface microlayer of a black carbon-dominated tropical coastal ecosystem (Halong Bay, Vietnam)." Elementa-Sci. Anthrop.. 6 (2018): 13.
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2017

Doan, K. Q., et al. "Viral encephalopathy and retinopathy in aquaculture: a review." J Fish Dis. 40.5 (2017): 717–742.
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Richard, M., et al. "Influence of OSHV-1 oyster mortality episode on dissolved inorganic fluxes: An ex situ experiment at the individual scale." Aquaculture. 475 (2017): 40–51.
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2016

Tsiola, A., et al. "Nutrient Limitation in Surface Waters of the Oligotrophic Eastern Mediterranean Sea: an Enrichment Microcosm Experiment." Microb Ecol. 71.3 (2016): 575–588.
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Van Beveren, E., et al. "Can pathogens alter the population dynamics of sardine in the NW Mediterranean?" Mar. Biol.. 163.12 (2016): Unsp-240.
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2015

Nguyen-Kim, H., et al. "Viral and Bacterial Epibionts in Thermally-Stressed Corals." Journal of Marine Science and Engineering. 3.4 (2015): 1272–1286.
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2014

Doan, T. T., et al. "Influence of buffalo manure, compost, vermicompost and biochar amendments on bacterial and viral communities in soil and adjacent aquatic systems." Applied Soil Ecology. 73 (2014): 78–86.
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2013

Combe, M., et al. "Freshwater prokaryote and virus communities can adapt to a controlled increase in salinity through changes in their structure and interactions." Estuarine Coastal and Shelf Science. 133 (2013): 58–66.
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2012

Bouvy, M., et al. "Uncoupled viral and bacterial distributions in coral reef waters of Tuamotu Archipelago (French Polynesia)." Marine Pollution Bulletin. 65.10–12 (2012): 506–515.
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2009

Auguet, J. C., et al. "Potential effect of freshwater virus on the structure and activity of bacterial communities in the Marennes-Oleron Bay (France)." Microb Ecol. 57.2 (2009): 295–306.
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Bonilla-Findji, O., et al. "Effect of seawater-freshwater cross-transplantations on viral dynamics and bacterial diversity and production." Aquat. Microb. Ecol.. 54.1 (2009): 1–11.
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2006

Auguet, J. C., H. Montanie, and P. Lebaron. "Structure of virioplankton in the Charente Estuary (France): transmission electron microscopy versus pulsed field gel electrophoresis." Microb Ecol. 51.2 (2006): 197–208.
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2005

Auguet, J. C., et al. "Dynamic of virioplankton abundance and its environmental control in the Charente estuary (France)." Microb Ecol. 50.3 (2005): 337–349.
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