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Auteur Basset, A.; Barbone, E.; Elliott, M.; Li, B.-L.; Jorgensen, S.E.; Lucena-Moya, P.; Pardo, I.; Mouillot, D.
Titre A unifying approach to understanding transitional waters: Fundamental properties emerging from ecotone ecosystems Type Article scientifique
Année (up) 2013 Publication Revue Abrégée Estuarine Coastal and Shelf Science
Volume Numéro Pages
Mots-Clés climate change; ecotone concept; landscape ecology; transitional waters
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Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0272-7714 ISBN Médium
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 433
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Auteur Fouilland, E.; Tolosa, I.; Bonnet, D.; Bouvier, C.; Bouvier, T.; Bouvy, M.; Got, P.; Le Floc'h, E.; Mostajir, B.; Roques, C.; Sempéré, R.; Sime-Ngando, T.; Vidussi, F.
Titre Bacterial carbon dependence on freshly produced phytoplankton exudates under different nutrient availability and grazing pressure conditions in coastal marine waters Type Article scientifique
Année (up) 2014 Publication Revue Abrégée FEMS microbiology ecology
Volume 87 Numéro 3 Pages 757-769
Mots-Clés bacteria; carbon coupling; coastal waters; interactions; phytoplankton
Résumé The effects of grazing pressure and inorganic nutrient availability on the direct carbon transfer from freshly produced phytoplankton exudates to heterotrophic bacteria biomass production were studied in Mediterranean coastal waters. The short-term incorporation of (1)(3)C (H(1)(3)CO(3)) in phytoplankton and bacterial lipid biomarkers was measured as well as the total bacterial carbon production (BP), viral lysis and the microbial community structure under three experimental conditions: (1) High inorganic Nutrient and High Grazing (HN + HG), (2) High inorganic Nutrient and Low Grazing (HN + LG) and (3) under natural in situ conditions with Low inorganic Nutrient and High Grazing (LN + HG) during spring. Under phytoplankton bloom conditions (HN + LG), the bacterial use of freshly produced phytoplankton exudates as a source of carbon, estimated from (1)(3)C enrichment of bacterial lipids, contributed more than half of the total bacterial production. However, under conditions of high grazing pressure on phytoplankton with or without the addition of inorganic nutrients (HN + HG and LN + HG), the (1)(3)C enrichment of bacterial lipids was low compared with the high total bacterial production. BP therefore seems to depend mainly on freshly produced phytoplankton exudates during the early phase of phytoplankton bloom period. However, BP seems mainly relying on recycled carbon from viral lysis and predators under high grazing pressure.
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ISSN 1574-6941 ISBN Médium
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 444
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Auteur Fouilland, E.; Vasseur, C.; Leboulanger, C.; Le Floc'h, E.; Carré, C.; Marty, B.; Steyer, J.-P.; Sialve, B.
Titre Coupling algal biomass production and anaerobic digestion: Production assessment of some native temperate and tropical microalgae Type Article scientifique
Année (up) 2014 Publication Revue Abrégée Biomass & Bioenergy
Volume Numéro Pages
Mots-Clés Digestates; Extreme natural environments; Wastewaters; chlorophyta; cyanobacteria; microalgae
Résumé Coupling algal biomass production and anaerobic digestion is one of the most promising bioprocesses for economically viable algal production. This study assesses the production rates of some native microalgae growing in media supplemented with algal digestate, urban wastewater or digested sludge. Native microalgal populations isolated from temperate freshwaters (Scenedesmus spp.) and marine ecosystems (Nannochloris spp.) had the highest potential production rates (about 100 mg DW L−1 d−1) with algal digestate at about 20% loading ratio. However, no growth was measured for Nannochloris spp., when the ammonium concentration exceeded 100 mg L−1 although Scenedesmus spp. appeared to be tolerant to higher NH4+ concentrations. Very low production rates, or no growth, were measured when microalgae isolated from high salinity waters (Dunaliella salina, Lyngbya aestuarii) were used, suggesting that populations well adapted to extreme environmental conditions are not suitable candidates for growing on wastewater or anaerobic digestate.
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Volume de collection Numéro de collection Edition
ISSN 0961-9534 ISBN Médium
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 494
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Auteur Minguez, L.; Pedelucq, J.; Farcy, E.; Ballandonne, C.; Budzinski, H.; Halm-Lemeille, M.-P.
Titre Toxicities of 48 pharmaceuticals and their freshwater and marine environmental assessment in northwestern France Type Article scientifique
Année (up) 2016 Publication Revue Abrégée Environ. Sci. Pollut. Res.
Volume 23 Numéro 6 Pages 4992-5001
Mots-Clés antibiotics; Aquatic environment; aquatic environment; Ecotoxicity; emerging contaminants; Fate; mec; pec; Pharmaceuticals; prioritization; risk; risk-assessment; sensitivity; surface waters
Résumé A risk assessment for freshwater and marine ecosystems is presented for 48 pharmaceutical compounds, belonging to 16 therapeutic classes, and prescribed in northwestern France. Ecotoxicity data were obtained on two freshwater organisms, i.e., crustacean Daphnia magna and the green algae Pseudokirchneriella subcapitata, and on two marine organisms, i.e., the crustacean Artemia salina and the diatom Skeletonema marinoi. Measured environmental concentrations (MEC), in the Orne River and sea off Merville-Franceville in the Basse-Normandie region, were compared to the predicted environmental concentrations (PEC). Predicted no-effect concentrations (PNEC) were derived from acute data for each compound. Then, a risk assessment for each compound and the mixture was performed by calculating risk quotients (RQ as PEC or MEC/PNEC ratio). Results showed that no immediate acute toxicities were expected even if some compounds displayed strong toxicities at very low concentrations. Antibiotics, antidepressants, and antifungals would deserve attention because of their high or median ecological risk suspected on marine and freshwater ecosystems. Marine ecosystems would be more sensitive to pharmaceutical residues.
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Langue English Langue du Résumé Titre Original
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ISSN 0944-1344 ISBN Médium
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Numéro d'Appel MARBEC @ alain.herve @ collection 2064
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Auteur Pirog, A.; Jaquemet, S.; Blaison, A.; Soria, M.; Magalon, H.
Titre Isolation and characterization of eight microsatellite loci from Galeocerdo cuvier (tiger shark) and cross-amplification in Carcharhinus leucas, Carcharhinus brevipinna, Carcharhinus plumbeus and Sphyrna lewini Type Article scientifique
Année (up) 2016 Publication Revue Abrégée PeerJ
Volume 4 Numéro Pages e2041
Mots-Clés age; bull; Carcharhiniform; Control region; growth; hawaiian waters; markers; microsatellites; movements; patterns; Population Genetics; software; western north-atlantic
Résumé The tiger shark Galeocerdo cuvier (Carcharhinidae) is a large elasmobranch suspected to have, as other apex predators, a keystone function in marine ecosystems and is currently considered Near Threatened (Red list IUCN). Knowledge on its ecology, which is crucial to design proper conservation and management plans, is very scarce. Here we describe the isolation of eight polymorphic microsatellite loci using 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries. Their characteristics were tested on a population of tiger shark (n = 101) from Reunion Island (South-Western Indian Ocean). All loci were polymorphic with a number of alleles ranging from two to eight. No null alleles were detected and no linkage disequilibrium was detected after Bonferroni correction. Observed and expected heterozygosities ranged from 0.03 to 0.76 and from 0.03 to 0.77, respectively. No locus deviated from Hardy-Weinberg equilibrium and the global F-IS of the population was of 0.04(NS). Some of the eight loci developed here successfully cross-amplified in the bull shark Carcharhinus leucas (one locus), the spinner shark Carcharhinus brevi pi n n a (four loci), the sandbar shark Carcharhinus plumbeus (five loci) and the scalloped hammerhead shark Sphyrna lewini (two loci). We also designed primers to amplify and sequence a mitochondrial marker, the control region. We sequenced 862 bp and found a low genetic diversity, with four polymorphic sites, a haplotype diversity of 0.15 and a nucleotide diversity of 2 x 10(-4).
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Langue English Langue du Résumé Titre Original
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ISSN 2167-8359 ISBN Médium
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Numéro d'Appel MARBEC @ alain.herve @ collection 1651
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