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Auteur Blanchet, M.; Pringault, O.; Panagiotopoulos, C.; Lefevre, D.; Charriere, B.; Ghiglione, J.-F.; Fernandez, C.; Aparicio, F.L.; Marrase, C.; Catala, P.; Oriol, L.; Caparros, J.; Joux, F. doi  openurl
  Titre When riverine dissolved organic matter (DOM) meets labile DOM in coastal waters: changes in bacterial community activity and composition Type Article scientifique
  Année 2017 Publication (up) Revue Abrégée Aquat. Sci.  
  Volume 79 Numéro 1 Pages 27-43  
  Mots-Clés Bacterial community composition; bacterioplankton; biodegradation; carbon; coastal waters; Dissolved organic matter; Fluorescence; growth efficiency; lake water; marine; Mediterranean Sea; open-ocean; Priming effect; rhone river; terrestrial  
  Résumé Heterotrophic bacterial communities in marine environments are exposed to a heterogeneous mixture of dissolved organic compounds with different bioreactivity that may control both their activity and composition. The coastal environment is an example of a mixing area where recalcitrant allochthonous organic matter from rivers can encounter labile organic matter from marine phytoplanktonic blooms. The objective of this study was to explore the effects of mixed qualities of dissolved organic matter (DOM) on bacterial community activity (BCA) and bacterial community composition (BCC) and to test for a priming effect when DOM sources are added in combination. Coastal marine bacterial communities were incubated separately with a mixture of amino acids and with natural riverine DOM or with both sources together for 42 days. Addition of amino acids alone or in combination with riverine DOM led to a similar stimulation of BCA compared to control condition, whereas addition of riverine DOM alone did not modify BCA compared to the control. On the contrary, BCC analyzed by 16S rRNA gene pyrosequencing was not affected by the addition of amino acids alone, but changed dramatically with riverine DOM alone or in combination with amino acids. Our results show that changes in BCA and BCC can be driven by different types of DOM, but that these changes are not necessarily coupled. Moreover, the addition of labile DOM did not modify the microbial decomposition of riverine DOM, nor the BCC, suggesting that a priming effect did not occur under these experimental conditions.  
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  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 1015-1621 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ collection 2090  
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Auteur Bonnet, D.; Molinero, J.C.; Schohn, T.; Yahia, M.N.D. url  openurl
  Titre Seasonal changes in the population dynamics of Aurelia aurita in Thau lagoon Type Article scientifique
  Année 2012 Publication (up) Revue Abrégée Cah. Biol. Mar.  
  Volume 53 Numéro 3 Pages 343-347  
  Mots-Clés Aurelia aurita; Mediterranean Sea; abundance; fishes; jellyfish; lagoon; scyphomedusae; sea  
  Résumé Seasonal dynamics of the scyphomedusae, Aurelia aurita, was investigated twice a month from January 2010 to June 2011 and related to environmental conditions in Thau lagoon, southwestern Mediterranean Sea. Strobilation, indicated by the presence of 1 mm ephyrae, occurred from November to the middle of April. Maximum abundances up to 330 ind.100 m(-3) were reached in May 2011, few weeks after the last ephyrae release. The population declines afterwards steadily until disappearing from the water column. Concurrent with increased water temperature and mesozooplankton predation during May, growth rates increased from 0.04 mm.day(-1) to a peak of 4.5 mm.day(-1), with a maximum bell diameter of 11.3 cm reached on the 7th May. During the study period, there was no advection of A. aurita between Thau lagoon and the coastal waters.  
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  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0007-9723 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 820  
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Auteur Albouy, C.; Mouillot, D.; Rocklin, D.; Culioli, J.M.; Loc'h, F.L. url  doi
openurl 
  Titre Simulation of the combined effects of artisanal and recreational fisheries on a Mediterranean MPA ecosystem using a trophic model Type Article scientifique
  Année 2010 Publication (up) Revue Abrégée Marine Ecology – Progress Series  
  Volume 412 Numéro Pages 207-221  
  Mots-Clés activities; Artisanal; cascades; Ecopath; Ecosim; Epinephelus; fisheries; marginatus; Mediterranean; Mpa; Recreational; Sea; Trophic; with  
  Résumé Marine protected areas (MPAs) have the potential to enhance the long-term sustainability of coastal resources, and the artisanal fisheries which depend on them. However, recreational fisheries, which are increasing their impacts on coastal resources worldwide, may reduce the benefits that MPAs provide to declining artisanal fisheries. Here we used the Bonifacio Straits Natural Reserve (BSNR) Corsica as a study case to simulate the combined effects on coastal resources of artisanal and recreational fishing efforts. The BSNR ecosystem was modelled using mass-balance modelling of trophic interactions. This model was compared to another built on a non-protected area from the same region. We aggregated fishing fleets into artisanal and recreational categories, and we simulated various combinations of fishing effort over a 20 yr dynamic simulation using Ecosim. We showed that fishing activities have an additional top-down effect on the food web and that they decrease the targeted group's biomass, such as piscivorous species. We found, for some trophic groups, non-trivial patterns of biomass variation through trophic cascades. Our trophic approach revealed that some groups may suffer a biomass decrease when MPAs are set or enforced, due to the combined effect of artisanal and recreational fisheries. Overall, our results illustrate the value of modelling to manage MPAs, as a complementary tool to surveys. Models provide the opportunity to anticipate the potential consequences, at the ecosystem level, of socio-political decisions that aim to sustain coastal resources while managing artisanal and recreational fisheries.  
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  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0171-8630 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel LL @ pixluser @ collection 55  
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Auteur Pringault, O.; Tesson, S.; Rochelle-Newall, E. url  doi
openurl 
  Titre Respiration in the Light and Bacterio-Phytoplankton Coupling in a Coastal Environment Type Article scientifique
  Année 2009 Publication (up) Revue Abrégée Microb. Ecol.  
  Volume 57 Numéro 2 Pages 321-334  
  Mots-Clés bacteria; dissolved organic-carbon; enhanced dark; growth efficiency; heterotrophic; marine bacterioplankton; nw mediterranean sea; post-illumination respiration; respiration; salt-marsh estuaries; solar; ultraviolet-radiation; uv-radiation  
  Résumé In pelagic ecosystems, the principal source of organic matter is via autotrophic production and the primary sink is through heterotrophic respiration. One would therefore anticipate that there is some degree of linkage between these two compartments. Recent work has shown that respiration in the light is higher than dark respiration. Consequently, many of the methods used to determine respiration and production are biased as they require the assumption that light and dark respiration rates are equivalent. We show here that, in a coastal ecosystem, under visible light exposure, respiration in the light is related to gross production. More than 60% of the variation of respiration in the light, measured at 1 to 40 A mu g L(-1) of chlorophyll a (Chla), could be explained by the variations of gross production. Secondly, the relative contribution of bacterial respiration to community respiration in the light represented up to 79% at low Chla (1 A mu g L(-1)) and was negatively correlated with Chla concentration. Although bacterial production and bacterial respiration were both enhanced in the light, bacterial respiration in the light was more stimulated than bacterial production, which resulted in a decrease in bacterial growth efficiency during light exposure. These results show that the impact of light on the functioning of the microbial loop needs to be taken into account for a better understanding of the oceanic carbon cycle.  
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  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0095-3628 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 826  
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Auteur BLANCHETON, J.-P.; D'ORBCAS℡, E.R.O.Q.U.E.; LEMARIE, G.; BREUIL, G.; PETOCHI, T.; MARINO, G.; TRIPLET, S.; DUTTO, G.; FIVELSTAD, S.; COEURDACIER, J.-L. url  openurl
  Titre Effects of rearing density on sea bass (Dicentrarchus labrax) biological performance, blood parameters and disease resistance in a flow through system Type Article scientifique
  Année 2010 Publication (up) Revue Abrégée Aquatic Living Resources  
  Volume 23 Numéro 1 Pages 109-117  
  Mots-Clés Flow through system; Rearing density; Sea bass; Stress; Water quality  
  Résumé During 84 days, the effects of density on juvenile sea bass (Dicentrarchus labrax) (76 +/- 16 g) were studied in an experimental tank-based flow through system. Performance, stress response and resistance to virus infection were analysed under five stabilized rearing densities: 10, 20, 40, 70 and 100 kg m(-3). Water quality parameters (CO2, total ammonia nitrogen and O-2) were measured and maintained close to the recommended values for farmed sea bass by adjusting water renewal exchange. No significant differences were observed between density treatments, neither on stress response (cortisol) nor susceptibility to nodavirus. With regards to biological performances, the daily feed intake and specific growth rate were significantly lower in fish reared at the 100 kg m(-3) density. Results on the effects of density in sea bass reared in flow through (present study) and in recirculating aquaculture systems (RAS) (Sammouth et al. 2009) were compared as a contribution to the identification of density not affecting health and welfare in farmed sea bass.  
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  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0990-7440 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel LL @ pixluser @ collection 59  
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