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Auteur Descombes, P.; Gaboriau, T.; Albouy, C.; Heine, C.; Leprieur, F.; Pellissier, L.
Titre Linking species diversification to palaeo-environmental changes: A process-based modelling approach Type Article scientifique
Année 2018 Publication Revue Abrégée Glob. Ecol. Biogeogr.
Volume 27 Numéro 2 Pages 233-244
Mots-Clés patterns; biodiversity; latitudinal gradient; richness; diversification; climate-change; marine ecosystems; fish diversity; genetic diversity; biodiversity dynamics; extinction rates; fossils; global simulation models; mangrove; oceanic dispersal; palaeo-environments; plate-tectonics
Résumé Aim: The importance of quantifying the contribution of historical processes in shaping current biodiversity patterns is now recognized, but quantitative approaches that explicitly link speciation, extinction and dispersal processes to palaeo-environmental changes are currently lacking. Here, we propose a spatial diversification model of lineages through time (SPLIT) based on the reconstruction of palaeo-environments. We illustrate our approach using mangroves as a case study and evaluate whether habitat changes caused by plate tectonics explain the current biodiversity patterns of this group. Innovations: The SPLIT model allows one to simulate the evolutionary dynamics of species ranges by spatially linking speciation, extinction and dispersal processes to habitat changes over geological time periods. The SPLIT model provides a mechanistic expectation of speciation and extinction assuming that species are ecologically identical and not interacting. The likelihood of speciation and extinction is equivalent across species and depends on two dispersal parameters interacting with habitat dynamics (d a maximum dispersal distance and ds a distance threshold beyond which gene flow is absent). Beyond classical correlative approaches, this model tracks biodiversity dynamics under palaeo-environmental changes and provides multiple expectations (i.e., alpha-, beta-diversity, phylogenies) that can be compared to empirical patterns. Main conclusions: The SPLIT model allows a better understanding of the origin of biodiversity by explicitly accounting for habitat changes over geological times. The simulations applied to the mangrove case study reproduced the observed longitudinal gradient in species richness, the empirical pattern of beta-diversity and also provided inference on diversification rates. Future developments may include niche evolution and species interactions to evaluate the importance of non-neutral mechanisms. The method is fully implemented in the InsideDNA platform for bioinformatics analyses, and all modelling results can be accessed via interactive web links.
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ISSN 1466-822x ISBN Médium
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Numéro d'Appel MARBEC @ alain.herve @ collection 2284
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Auteur Lett, C.; Barrier, N.; Bahlali, M.
Titre Converging approaches for modeling the dispersal of propagules in air and sea Type Article scientifique
Année 2020 Publication Revue Abrégée Ecol. Model.
Volume 415 Numéro Pages 108858
Mots-Clés Aerial dispersal; Aquatic dispersal; Atmospheric dispersal; Biophysical model; Eulerian model; Lagrangian model; larval dispersal; long-distance dispersal; Marine dispersal; Oceanic dispersal; particle trajectories; population connectivity; Propagule dispersal; reef fish; schooling behavior; seed dispersal; spatially explicit; terrestrial ecology; understanding recruitment; Wind dispersal
Résumé Terrestrial plants seeds, spores and pollen are often dispersed by wind. Likewise, most eggs and larvae of marine organisms are dispersed by oceanic currents. It was historically believed that the spatial scale at which dispersal occurs was orders of magnitude smaller for plants than for fish. However, recent empirical estimates of seed and larval dispersal suggest that these dispersal scales are more alike than previously thought. The modeling approaches used to simulate aerial and aquatic dispersal are also converging. Similar biophysical models are developed, in which outputs of Eulerian models simulating the main physical forcing mechanism (wind or currents) are used as inputs to Lagrangian models that include biological components (such as seed terminal velocity or larval vertical migration). These biophysical models are then used to simulate trajectories of the biological entities (seeds, larvae) in three dimensions. We reflect on these converging trends by first putting them into an historical perspective, and then by comparing the physical and biological processes represented in marine larva vs. terrestrial seed dispersal models, the data used for the models output corroboration, and the tools available to perform simulations. We conclude that this convergence offers the opportunity to bridge the gap between two scientific communities which are currently largely disconnected. More broadly, we also see our comparison across systems as a useful way to strengthen the links between aquatic and terrestrial ecology by sharing knowledge, methods, tools, and concepts.
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Langue English Langue du Résumé Titre Original
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Volume de collection Numéro de collection Edition
ISSN 0304-3800 ISBN Médium
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Notes WOS:000501415400006 Approuvé pas de
Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2706
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