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Auteur BLANCHETON, J.-P.; Attramadal, K.J.K.; MICHAUD, L.; ROQUE D'ORBCASTEL, E.; Vadstein, O.
Titre Insight into bacterial population in aquaculture systems and its implication Type Article scientifique
Année 2013 Publication Aquacultural Engineering Revue Abrégée
Volume 53 Numéro Pages 30-39
Mots-Clés Intensive systems; Water recirculation; Bacterial population; Microbial management; Fish health
Résumé The current onshore aquaculture trend is to develop large scale production of diversified fingerlings and very large units for fish ongrowing. This requires an industrial type of approach including quality assurance and minimization of failures in addition to management of bio-technical and economic aspects. Therefore, all the key biological mechanisms involved in Recirculating Aquaculture Systems (RAS) need to be better understood, especially those determining the development of bacterial populations and their interactions with fish. This review presents new knowledge on bacterial community compositions in various parts of RAS and on bacterial-fish interactions in RAS, which constitute essential tools for system management. (C) 2012 Elsevier B.V. All rights reserved.
Adresse Norwegian Univ Sci & Technol NTNU, Dept Biotechnol, Trondheim, Norway.
Auteur institutionnel Thèse
Editeur Elsevier Sci Ltd Lieu de Publication Éditeur
Langue Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0144-8609 ISBN Médium
Région Expédition Conférence
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ 24464 collection 1219
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Auteur Brosset, P.; Fromentin, J.-M.; Van Beveren, E.; Lloret, J.; Marques, V.; Basilone, G.; Bonanno, A.; Carpi, P.; Donato, F.; Čikeš Keč, V.; De Felice, A.; Ferreri, R.; Gašparević, D.; Giráldez, A.; Gücü, A.; Iglesias, M.; Leonori, I.; Palomera, I.; Somarakis, S.; Tičina, V.; Torres, P.; Ventero, A.; Zorica, B.; Ménard, F.; Saraux, C.
Titre Spatio-temporal patterns and environmental controls of small pelagic fish body condition from contrasted Mediterranean areas Type Article scientifique
Année 2017 Publication Revue Abrégée Progress in Oceanography
Volume 151 Numéro Pages 149-162
Mots-Clés Anchovy; Fish health; Marine monitoring; Sardine
Résumé Small pelagic fish are among the most ecologically and economically important marine fish species and are characterized by large fluctuations all over the world. In the Mediterranean Sea, low catches and biomass of anchovies and sardines have been described in some areas during the last decade, resulting in important fisheries crises. Therefore, we studied anchovy and sardine body condition variability, a key index of population health and its response to environmental and anthropogenic changes. Wide temporal and spatial patterns were investigated by analyzing separately data from scientific surveys and fisheries in eight Mediterranean areas between 1975 and 2015.

Results showed that anchovy and sardine body condition as well as maximum size in some areas sharply decreased in most Mediterranean areas along years (except in the Northern Alboran Sea). Despite this general pattern, well-marked environmental differences between sub-regions were highlighted by several analyses and variations in body condition were not found to be homogeneous over all the Mediterranean Sea. Further, other analyses revealed that except for the Adriatic where major changes towards a lower body condition were concomitant with a decrease in river runoffs and chl-a concentration, no concomitant environmental regime shift was detected in other areas.

Together, these analyses highlighted the current poor body condition of almost all small pelagic fish populations in the Mediterranean. Yet, global environmental indices could not explain the observed changes and the general decrease in condition might more likely come from regional environmental and/or anthropogenic (fishing) effects. A prolonged state of poor fish body condition, together with an observed reduced size and early age-at-maturity may have strong ecological, economic and social consequences all around the Mediterranean Sea.
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Editeur Lieu de Publication Éditeur
Langue Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0079-6611 ISBN Médium
Région Expédition Conférence
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1717
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Auteur Chiarello, M.; Auguet, J.-C.; Graham, N.A.J.; Claverie, T.; Sucre, E.; Bouvier, C.; Rieuvilleneuve, F.; Restrepo-Ortiz, C.X.; Bettarel, Y.; Villeger, S.; Bouvier, T.
Titre Exceptional but vulnerable microbial diversity in coral reef animal surface microbiomes Type Article scientifique
Année 2020 Publication Revue Abrégée Proc. R. Soc. B-Biol. Sci.
Volume 287 Numéro 1927 Pages 20200642
Mots-Clés habitat; fish; conservation; phylogenetic diversity; health; index; communities; evenness; marine biodiversity; mayotte; Octocorallia; Scleratinia; skin microbiota; susceptibility; synechococcus
Résumé Coral reefs host hundreds of thousands of animal species that are increasingly threatened by anthropogenic disturbances. These animals host microbial communities at their surface, playing crucial roles for their fitness. However, the diversity of such microbiomes is mostly described in a few coral species and still poorly defined in other invertebrates and vertebrates. Given the diversity of animal microbiomes, and the diversity of host species inhabiting coral reefs, the contribution of such microbiomes to the total microbial diversity of coral reefs could be important, yet potentially vulnerable to the loss of animal species. Analysis of the surface microbiome from 74 taxa, including teleost fishes, hard and soft corals, crustaceans, echinoderms, bivalves and sponges, revealed that more than 90% of their prokaryotic phylogenetic richness was specific and not recovered in surrounding plankton. Estimate of the total richness associated with coral reef animal surface microbiomes reached up to 2.5% of current estimates of Earth prokaryotic diversity. Therefore, coral reef animal surfaces should be recognized as a hotspot of marine microbial diversity. Loss of the most vulnerable reef animals expected under present-day scenarios of reef degradation would induce an erosion of 28% of the prokaryotic richness, with unknown consequences on coral reef ecosystem functioning.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue English Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0962-8452 ISBN Médium
Région Expédition Conférence
Notes WOS:000536677500005 Approuvé pas de
Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2908
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Auteur Larras, F.; Rimet, F.; Gregorio, V.; Bérard, A.; Leboulanger, C.; Montuelle, B.; Bouchez, A.
Titre Pollution-induced community tolerance (PICT) as a tool for monitoring Lake Geneva long-term in situ ecotoxic restoration from herbicide contamination Type Article scientifique
Année 2016 Publication Revue Abrégée Environ Sci Pollut Res
Volume 23 Numéro 5 Pages 4301-4311
Mots-Clés Atmospheric Protection/Air Quality Control/Air Pollution; Atrazine; Copper; Ecotoxicology; Environmental Chemistry; Environmental Health; Environment, general; Phytoplankton; Pollution-induced community tolerance (PICT); Restoration; Waste Water Technology / Water Pollution Control / Water Management / Aquatic Pollution
Résumé Chemical monitoring revealed a regular decrease in herbicide concentration in Lake Geneva since last decades that may be linked to an ecotoxic restoration of nontarget phytoplanktonic communities. The Pollution-induced community tolerance (PICT) approach was tested as a tool to monitor the ecotoxic restoration of Lake Geneva for herbicides from 1999 to 2011. We conducted monthly assessments in 1999 and in 2011 for the tolerance of the phytoplankton communities to two herbicides (atrazine and copper), using PICT bioassays. The taxonomical composition of the communities was determined on the same collecting dates. The herbicide concentration decrease during the 12 years significantly influenced the composition of communities. The PICT monitoring indicated that a significant tolerance decrease in the community to both herbicides accompanied the herbicide concentration decrease. PICT measurements for atrazine and copper also changed at the intra-annual level. These variations were mainly due to community composition shifts linked to seasonal phosphorus and temperature changes. PICT monitoring on a seasonal basis is required to monitor the mean tolerance of communities. PICT appeared to be a powerful tool that reflected the toxic effects on environmental communities and to monitor ecotoxic ecosystem restoration.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue en Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0944-1344, 1614-7499 ISBN Médium
Région Expédition Conférence
Notes Approuvé pas de
Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1557
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Auteur Louati, H.; Said, O.B.; Soltani, A.; Cravo-Laureau, C.; Duran, R.; Aissa, P.; Mahmoudi, E.; Pringault, O.
Titre Responses of a free-living benthic marine nematode community to bioremediation of a PAH mixture Type Article scientifique
Année 2015 Publication Revue Abrégée Environ Sci Pollut Res
Volume 22 Numéro 20 Pages 15307-15318
Mots-Clés Atmospheric Protection/Air Quality Control/Air Pollution; Bioaugmentation; Biostimulation; Community response; Ecotoxicology; Environmental Chemistry; Environmental Health; Environment, general; Free-living nematodes; Polycyclic aromatic hydrocarbons; Sediment; Waste Water Technology / Water Pollution Control / Water Management / Aquatic Pollution
Résumé The objectives of this study were (1) to assess the responses of benthic nematodes to a polycyclic aromatic hydrocarbon (PAH) contamination and (2) to test bioremediation techniques for their efficiency in PAH degradation and their effects on nematodes. Sediments with their natural nematofauna communities from Bizerte lagoon (Tunisia) were subjected to a PAH mixture (100 ppm) of phenanthrene, fluoranthene, and pyrene during 30 days. Nematode abundance and diversity significantly decreased, and the taxonomic structure was altered. Results from multivariate analyses of the species abundance data revealed that PAH treatments were significantly different from the control. Spirinia parasitifera became the dominant species (70 % relative abundance) and appeared to be an “opportunistic” species to PAH contamination while Oncholaimus campylocercoides and Neochromadora peocilosoma were strongly inhibited. Biostimulation (addition of mineral salt medium) and bioaugmentation (inoculation of a hydrocarbonoclastic bacterium) were used as bioremediation techniques. Bioremediation treatments enhanced degradation of all three PAHs, with up to 96 % degradation for phenanthrene resulting in a significant stimulation of nematode abundance relative to control microcosms. Nevertheless, these treatments, especially the biostimulation provoked a weak impact on the community structure and diversity index relative to the control microcosms suggesting their feasibility in biorestoration of contaminated sediments.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue en Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0944-1344, 1614-7499 ISBN Médium
Région Expédition Conférence
Notes Approuvé pas de
Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1421
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