bascule de visibilité Search & Display Options

Tout Sélectionner    Désélectionner
 |   | 
Détails
   print
  Enregistrements Liens
Auteur Sebastian, M.; Smith, A.F.; Gonzalez, J.M.; Fredricks, H.F.; Van Mooy, B.; Koblizek, M.; Brandsma, J.; Koster, G.; Mestre, M.; Mostajir, B.; Pitta, P.; Postle, A.D.; Sanchez, P.; Gasol, J.M.; Scanlan, D.J.; Chen, Y. doi  openurl
  Titre Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency Type Article scientifique
  Année 2016 Publication Revue Abrégée Isme J.  
  Volume 10 Numéro 4 Pages 968-978  
  Mots-Clés (up) 2 enzymes; agrobacterium-tumefaciens; bacterioplankton groups; Ecology; Mediterranean Sea; mesocosm experiment; microbial food-web; north-atlantic ocean; nutrient limitation; phosphate starvation  
  Résumé Upon phosphorus (P) deficiency, marine phytoplankton reduce their requirements for P by replacing membrane phospholipids with alternative non-phosphorus lipids. It was very recently demonstrated that a SAR11 isolate also shares this capability when phosphate starved in culture. Yet, the extent to which this process occurs in other marine heterotrophic bacteria and in the natural environment is unknown. Here, we demonstrate that the substitution of membrane phospholipids for a variety of non-phosphorus lipids is a conserved response to P deficiency among phylogenetically diverse marine heterotrophic bacteria, including members of the Alphaproteobacteria and Flavobacteria. By deletion mutagenesis and complementation in the model marine bacterium Phaeobacter sp. MED193 and heterologous expression in recombinant Escherichia coli, we confirm the roles of a phospholipase C (PlcP) and a glycosyltransferase in lipid remodelling. Analyses of the Global Ocean Sampling and Tara Oceans metagenome data sets demonstrate that PlcP is particularly abundant in areas characterized by low phosphate concentrations. Furthermore, we show that lipid remodelling occurs seasonally and responds to changing nutrient conditions in natural microbial communities from the Mediterranean Sea. Together, our results point to the key role of lipid substitution as an adaptive strategy enabling heterotrophic bacteria to thrive in the vast P-depleted areas of the ocean.  
  Adresse  
  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 1751-7362 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ collection 1624  
Lien permanent pour cet enregistrement
 

 
Auteur Canard, E.F.; Mouquet, N.; Mouillot, D.; Stanko, M.; Miklisova, D.; Gravel, D. url  doi
openurl 
  Titre Empirical Evaluation of Neutral Interactions in Host-Parasite Networks Type Article scientifique
  Année 2014 Publication Revue Abrégée American Naturalist  
  Volume 183 Numéro 4 Pages 468-479  
  Mots-Clés (up) abundance; animal mutualistic networks; community; dissimilarity; effort; food-web structure; geographical variation; host-parasite network; network structure; neutrality; null model; phylogenetic signal; reconciling niche; sampling; scale-dependence; species abundance distribution  
  Résumé While niche-based processes have been invoked extensively to explain the structure of interaction networks, recent studies propose that neutrality could also be of great importance. Under the neutral hypothesis, network structure would simply emerge from random encounters between individuals and thus would be directly linked to species abundance. We investigated the impact of species abundance distributions on qualitative and quantitative metrics of 113 host-parasite networks. We analyzed the concordance between neutral expectations and empirical observations at interaction, species, and network levels. We found that species abundance accurately predicts network metrics at all levels. Despite host-parasite systems being constrained by physiology and immunology, our results suggest that neutrality could also explain, at least partially, their structure. We hypothesize that trait matching would determine potential interactions between species, while abundance would determine their realization.  
  Adresse  
  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0003-0147 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 573  
Lien permanent pour cet enregistrement
 

 
Auteur Coll, M.; Steenbeek, J.; Sole, J.; Palomera, I.; Christensen, V. doi  openurl
  Titre Modelling the cumulative spatial-temporal effects of environmental drivers and fishing in a NW Mediterranean marine ecosystem Type Article scientifique
  Année 2016 Publication Revue Abrégée Ecol. Model.  
  Volume 331 Numéro Pages 100-114  
  Mots-Clés (up) acoustic estimation; anchovy engraulis-encrasicolus; climate-change; Cumulative effects; Ecopath with Ecosim; environment; european hake; exploited ecosystems; fishing; food-web model; food webs; hake merluccius-merluccius; protected areas; south catalan sea; trawling disturbance  
  Résumé To realistically predict spatial-temporal dynamics of species in marine ecosystems it is essential to consider environmental conditions in conjunction with human activities and food web dynamics. In this study, we used Ecospace, the spatial-temporal dynamic module of Ecopath with Ecosim (EwE) food web model, to drive a spatially explicit marine food web model representing the Southern Catalan Sea (NW Mediterranean) with various environmental drivers and with fishing. We then evaluated the individual and joint effects of environmental conditions and fishing in various compartments of the food web. First we used a previously developed EwE model fitted to time series of data from 1978 to 2010 as a baseline configuration. The model included 40 functional groups and four fishing fleets. We first ran the original Ecospace spatial-temporal dynamic model using the original habitat configuration, in addition to fishing, and we predicted species distributions and abundances. Afterwards, we ran the new habitat foraging capacity model using the most important environmental drivers linked with the Ebro River delta dynamics (salinity, temperature, and primary production), in addition to depth, substrate and fishing, and we compared results with those from the original implementation of Ecospace. Three commercial species, European hake (Merluccius merluccius), anchovy (Engraulis encrasicolus) and sardine (Sardina pilchardus), were used to analyse results. Species distributions more closely matched the empirical information available from the study area when using the new habitat capacity model. Results suggested that the historical impacts of fishing and environmental conditions on the biomass and distributions of hake, anchovy and sardine were not additive, but mainly cumulative with a synergistic or antagonistic effect. Fishing had the highest impact on spatial modelling results while the spatial distribution of primary producers and depth followed in importance. This study contributes to the development of more reliable predictions of regional change in marine ecosystems of the Mediterranean Sea. (C) 2016 Elsevier B.V. All rights reserved.  
  Adresse  
  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0304-3800 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ collection 1643  
Lien permanent pour cet enregistrement
 

 
Auteur Shannon, L.J.; Coll, M.; Yemane, D.; Jouffre, D.; Neira, S.; Bertrand, A.; Diaz, E.; Shin, Y.J. url  doi
openurl 
  Titre Comparing data-based indicators across upwelling and comparable systems for communicating ecosystem states and trends Type Article scientifique
  Année 2010 Publication Revue Abrégée ICES J. Mar. Sci.  
  Volume 67 Numéro 4 Pages 807-832  
  Mots-Clés (up) adriatic sea; central chile; comparative approach; demersal resources; fishing impacts; food-web; global fisheries; humboldt current system; indicator; nw mediterranean sea; pelagic fish; regime shifts; southern benguela; upwelling  
  Résumé Shannon, L. J., Coll, M., Yemane, D., Jouffre, D., Neira, S., Bertrand, A., Diaz, E., and Shin, Y-J. 2010. Comparing data-based indicators across upwelling and comparable systems for communicating ecosystem states and trends. – ICES Journal of Marine Science, 67: 807-832.  
  Adresse  
  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 1054-3139 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 482  
Lien permanent pour cet enregistrement
 

 
Auteur Albo-Puigserver, M.; Navarro, J.; Coll, M.; Layman, C.A.; Palomera, I. doi  openurl
  Titre Trophic structure of pelagic species in the northwestern Mediterranean Sea Type Article scientifique
  Année 2016 Publication Revue Abrégée J. Appl. Dev. Psychol.  
  Volume 47 Numéro Pages 27-35  
  Mots-Clés (up) anchovy engraulis-encrasicolus; biscay northeast atlantic; Community structure; diet composition; food-web; Food web; hake merluccius-merluccius; horse mackerel; Isotopic niche; mackerel scomber-japonicus; Pelagic fish; sardine sardina-pilchardus; Seasonal; seasonal-changes; Stable isotopes; stable-isotopes; Trophic segregation  
  Résumé Ecological knowledge of food web interactions within pelagic marine communities is often limited, impairing our capabilities to manage these ecologically and economically important marine fish species. Here we used stable isotope analyses to investigate trophic interactions in the pelagic ecosystem of the northwestern Mediterranean Sea during 2012 and 2013. Our results suggest that European sardine, Sardina pilchardus, and anchovy, Engraulis encrasicolus, are consumers located at relatively low levels of the pelagic food web. Unexpectedly, the round sardinella, Sardinella aurita, appeared to be located at a higher trophic level than the other small pelagic fish species, although previous studies found similarity in their diets. Isotope data suggested that trophic niches of species within the genera Trachurus spp. and Scomber spp., were distinct. Atlantic bonito Sarda sarda, European hake Merluccius merluccius and European squid Loligo vulgaris, appeared to feed at higher trophic levels than other species. Despite some intraspecific seasonal variability for some species, community trophic structure appeared relatively stable through the year. These data provide an important step for developing models of food web dynamics in the northwestern Mediterranean Sea. (C) 2016 Elsevier B.V. All rights reserved.  
  Adresse  
  Auteur institutionnel Thèse  
  Editeur Lieu de Publication Éditeur  
  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0193-3973 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ collection 1691  
Lien permanent pour cet enregistrement
Tout Sélectionner    Désélectionner
 |   | 
Détails
   print

Save Citations:
Export Records: