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Auteur Turon, V.; Baroukh, C.; Trably, E.; Latrille, E.; Fouilland, E.; Steyer, J.-P. url  doi
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  Titre Use of fermentative metabolites for heterotrophic microalgae growth: Yields and kinetics Type Article scientifique
  Année 2015 Publication Revue Abrégée Bioresource Technology  
  Volume 175 Numéro Pages 342-349  
  Mots-Clés Chlorella; Diauxic effect; Heterotrophy; Kinetic model; Volatile fatty acids  
  Résumé Abstract

The growth of two lipid-producing Chlorella species on fermentative end-products acetate, butyrate and lactate, was investigated using a kinetic modeling approach. Chlorella sorokiniana and Auxenochlorella protothecoides were grown on synthetic media with various (acetate:butyrate:lactate) ratios. Both species assimilated efficiently acetate and butyrate with yields between 0.4 and 0.5 g carbon of biomass/g carbon of substrate, but did not use lactate. The highest growth rate on acetate, 2.23 d−1, was observed for C. sorokiniana, and on butyrate, 0.22 d−1, for A. protothecoides. Butyrate removal started after complete acetate exhaustion (diauxic effect). However, butyrate consumption may be favored by the increase of biomass concentration induced by the initial use of acetate. A model combining Monod and Haldane functions was then built and fitted the experimental data well for both species. Butyrate concentration and (acetate:butyrate) ratios were identified as key parameters for heterotrophic growth of microalgae on fermentative metabolites.
 
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  ISSN 0960-8524 ISBN Médium  
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  Numéro d'Appel MARBEC @ alain.herve @ collection 1288  
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Auteur Bodin, N.; Lucas, V.; Dewals, P.; Adeline, M.; Esparon, J.; Chassot, E. url  doi
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  Titre Effect of brine immersion freezing on the determination of ecological tracers in fish Type Article scientifique
  Année 2014 Publication Revue Abrégée European Food Research and Technology  
  Volume 238 Numéro 6 Pages 1057-1062  
  Mots-Clés Brine immersion; Fatty acids; Frozen storage; Large pelagic fish; Persistent organic pollutants; Stable isotopes  
  Résumé The use of a multi-ecological tracer approach provides valuable and complementary insights to investigate the complex biology and ecology of large pelagic fish. Brine immersion freezing is the most common preservation technique used onboard for large fish to be frozen whole until they are delivered for sale and processing. We evaluated the effect of brine freezing on lipid and fatty acid composition, C and N stable isotope ratios, and organochlorine contaminant levels of yellowfin tuna (Thunnus albacares) and skipjack tuna (Katsuwonus pelamis). Fresh tunas were stored in a saturated sodium chlorine brine immersion tank maintained at -20 A degrees C for 6 weeks, and ecological tracers were analysed on dorsal muscle samples collected before and after brine freezing. No significant effect of the fish preservation technique was found except for delta N-15 whose signatures slightly increased after a 6-week period of brine immersion. Because N isotopic shift was close to the analytical precision and probably related to a higher risk of salt penetration in small tunas with abraded skin, we consider our results as conservative and conclude that ecological tracers can indeed be analysed on brine-freezing-preserved tunas.  
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  ISSN 1438-2377 ISBN Médium  
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Auteur Sardenne, F.; Kraffe, E.; Amiel, A.; Fouché, E.; Debrauwer, L.; Ménard, F.; Bodin, N. url  doi
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  Titre Biological and environmental influence on tissue fatty acid compositions in wild tropical tunas Type Article scientifique
  Année 2017 Publication Revue Abrégée Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology  
  Volume 204 Numéro Pages 17-27  
  Mots-Clés Biological membrane; Essential fatty acids; Large pelagic fish; Polar and neutral lipids; Pufa; Western Indian Ocean  
  Résumé This study examined the fatty acid composition of three sympatric tropical tuna species (bigeye Thunnus obesus, yellowfin T. albacares and skipjack tuna Kastuwonus pelamis) sampled in the Western Indian Ocean in 2013. The fatty acid compositions of neutral and polar lipids, respectively involved in energy storage and cell membrane structure, were explored and compared in four tissues (red and white muscles, liver and gonads), according to biological (size, sex and maturity) and environmental (season and area) factors. The liver and the red muscle were the fattest tissues (i.e., higher levels of storage lipids) in all species and polar lipids were the lowest in the white muscle. Species and tissue types explained most differences in fatty acid compositions, while environmental factors had limited effects, except in the hepatic cell membrane where fatty acid composition varied with monsoons. Docosahexaenoic acid (22:6n-3) was the major fatty acid in both polar and neutral lipid fractions, especially in muscles. Eicosapentaenoic acid (20:5n-3) and oleic acid (18:1n-9) were in higher proportion in neutral than in polar lipids. Arachidonic acid (20:4n-6) and 22:6n-3, together with docosapentaenoic acid (22:5n-6) and stearic acid (18:0), showed preferential accumulation in polar lipids. 20:4n-6 was particularly involved in cell membranes of ovary and white muscle. Overall, an important inter-individual variability in fatty acid compositions of structural lipids was found within tissue types despite considering biological factors that are most likely to influence this type of lipids. It suggests that fatty acid profiles are influenced by individual-specific behaviors.  
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  ISSN 1095-6433 ISBN Médium  
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Auteur Sardenne, F.; Hollanda, S.; Lawrence, S.; Albert-Arrisol, R.; Degroote, M.; Bodin, N. doi  openurl
  Titre Trophic structures in tropical marine ecosystems: a comparative investigation using three different ecological tracers Type Article scientifique
  Année 2017 Publication Revue Abrégée Ecol. Indic.  
  Volume 81 Numéro Pages 315-324  
  Mots-Clés feeding-behavior; Stable isotopes; food webs; Fatty acids; Mercury; western indian-ocean; gulf-of-mexico; amino-acid; stable-isotope; bioaccumulation; fatty-acid compositions; Indian ocean; mercury exposure; pelagic fishes; Tropical food web  
  Résumé We looked at how three ecological tracers may influence the characterization and interpretation of trophic structures in a tropical marine system, with a view to informing tracer(s) selection in future trophic ecology studies. We compared the trophic structures described by stable isotope compositions (carbon and nitrogen), the total mercury concentration (THg) and levels of essential fatty acids (EFA) at both the individual and species level. Analyses were undertaken on muscle tissue samples from fish and crustacean species caught in the waters surrounding the Seychelles. The carbon isotope composition (delta C-13) correlated to the proportion of arachidonic acid (ARA), whereas the nitrogen isotope composition (delta N-15) correlated to the proportion of docosahexaenoic acid (DHA) and THg. At the individual level, trophic position obtained with these three last tracers are similar. In ' contrast, the eicosapentaenoic acid (EPA) was not clearly correlated to any of the tracers. At the species level, the use of EFA (ARA and DHA), as compared to stable isotopes, resulted in slight structural modifications, mainly in the middle trophic levels. For example, the EFA overestimated the trophic positions of Thunnus alalunga and Etelis coruscans but underestimated the trophic positions of other snappers and groupers. While ARA mainly originates from coastal/benthic areas, DHA is conserved throughout the food web and may be used as a proxy indicator of trophic position. However, metabolic disparities can affect ecological tracers and in turn, distort the trophic structures derived from their results. This is especially true for species with close trophic ecologies. Despite these caveats, we think that analysing at the individual level the wealth of ARA, DHA and THg data that has already been obtained through earlier nutrition or food security studies would enhance our understanding of trophic structures.  
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  Langue English Langue du Résumé Titre Original  
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  ISSN 1470-160x ISBN Médium  
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  Numéro d'Appel MARBEC @ alain.herve @ collection 2246  
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Auteur Bodin, N.; Chassot, E.; Sardenne, F.; Zudaire, I.; Grande, M.; Dhurmeea, Z.; Murua, H.; Barde, J. url  doi
openurl 
  Titre Ecological data for western Indian Ocean tuna Type Article scientifique
  Année 2018 Publication Revue Abrégée Ecology  
  Volume 99 Numéro 5 Pages 1245-1245  
  Mots-Clés energetics; fatty acids; lipids; morphometrics; multi-tissues; proteins; stable isotopes; trophic ecology; tropical marine ecosystems; tuna fisheries  
  Résumé Tuna are marine apex predators that inhabit the tropical and sub-tropical waters of the Indian Ocean where they support socially and economically important fisheries. Key component of pelagic communities, tuna are bioindicator species of anthropogenic and climate-induced changes through modifications of the structure and related energy-flow of food webs and ecosystems. The IndianEcoTuna dataset provides a panel of ecological tracers measured in four soft tissues (white muscle, red muscle, liver, gonads) from 1,364 individuals of four species, i.e., the albacore (ALB, Thunnus alalunga), the bigeye (BET, T. obesus), the skipjack (SKJ, Katsuwomus pelamis), and the yellowfin (YFT, T. albacares), collected throughout the western Indian Ocean from 2009 to 2015. Sampling was carried out during routine monitoring programs, at sea by observers onboard professional vessels or at landing. For each record, the type of fishing gear, the conservation mode, as well as the fishing date and catch location are provided. Individuals were sampled to span a wide range of body sizes: 565 ALB with fork length from 58 to 118 cm, 155 BET from 29.5 to 173 cm, 304 SKJ from 30 to 74 cm, and 340 YFT from 29 to 171.5 cm. The IndianEcoTuna dataset combines: (1) 9,512 records of carbon and nitrogen stable isotopes (percent element weights, δ13C and δ15N values) in 1,185 fish, (2) 887 concentrations of total proteins in 242 fish, (3) 8,356 concentrations of total lipids and three lipid classes (triacylglycerols TAG; phospholipids PL; sterols ST) in 695 fish, and (4) 1,150 and 1,033 profiles of neutral and polar fatty acids in 397 and 342 fish, respectively. Information on sex and weights of the whole fish, gonads, liver and stomach is provided. Because of the essential trophic role and wide-ranging of tuna in marine systems, and the large panel of tropho-energetic tracers and derived-key quantitative parameters provided (e.g., niche width, trophic position, condition indices), the IndianEcoTuna dataset should be of high interest for global and regional research on marine trophic ecology and food web analysis, as well as on the impacts of anthropogenic changes on Indian Ocean marine ecosystems. There are no copyright restrictions for research and/or teaching purposes. Usage of the dataset must include citation of this Data Paper.  
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