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Auteur Bakker, J.; Wangensteen, O.S.; Chapman, D.D.; Boussarie, G.; Buddo, D.; Guttridge, T.L.; Hertler, H.; Mouillot, D.; Vigliola, L.; Mariani, S.
Titre Environmental DNA reveals tropical shark diversity in contrasting levels of anthropogenic impact Type Article scientifique
Année 2017 Publication Revue Abrégée Sci Rep
Volume 7 Numéro Pages (down) 16886
Mots-Clés management; ecosystem; conservation; fish communities; rays; populations; collapse; aquatic biodiversity; coral-reef fisheries; wilderness
Résumé Sharks are charismatic predators that play a key role in most marine food webs. Their demonstrated vulnerability to exploitation has recently turned them into flagship species in ocean conservation. Yet, the assessment and monitoring of the distribution and abundance of such mobile species in marine environments remain challenging, often invasive and resource-intensive. Here we pilot a novel, rapid and non-invasive environmental DNA (eDNA) metabarcoding approach specifically targeted to infer shark presence, diversity and eDNA read abundance in tropical habitats. We identified at least 21 shark species, from both Caribbean and Pacific Coral Sea water samples, whose geographical patterns of diversity and read abundance coincide with geographical differences in levels of anthropogenic pressure and conservation effort. We demonstrate that eDNA metabarcoding can be effectively employed to study shark diversity. Further developments in this field have the potential to drastically enhance our ability to assess and monitor elusive oceanic predators, and lead to improved conservation strategies.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue English Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 2045-2322 ISBN Médium
Région Expédition Conférence
Notes Approuvé pas de
Numéro d'Appel MARBEC @ alain.herve @ collection 2244
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Auteur Andrello, M.; Guilhaumon, F.; Albouy, C.; Parravicini, V.; Scholtens, J.; Verley, P.; Barange, M.; Sumaila, U.R.; Manel, S.; Mouillot, D.
Titre Global mismatch between fishing dependency and larval supply from marine reserves Type Article scientifique
Année 2017 Publication Revue Abrégée Nat. Commun.
Volume 8 Numéro Pages (down) 16039
Mots-Clés biodiversity conservation; climate-change; Connectivity; dispersal; fisheries management; impacts; Populations; protected areas; reef fishes; world
Résumé Marine reserves are viewed as flagship tools to protect exploited species and to contribute to the effective management of coastal fisheries. Yet, the extent to which marine reserves are globally interconnected and able to effectively seed areas, where fisheries are most critical for food and livelihood security is largely unknown. Using a hydrodynamic model of larval dispersal, we predict that most marine reserves are not interconnected by currents and that their potential benefits to fishing areas are presently limited, since countries with high dependency on coastal fisheries receive very little larval supply from marine reserves. This global mismatch could be reversed, however, by placing new marine reserves in areas sufficiently remote to minimize social and economic costs but sufficiently connected through sea currents to seed the most exploited fisheries and endangered ecosystems.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue English Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 2041-1723 ISBN Médium
Région Expédition Conférence
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2162
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Auteur Calcagno, V.; Jarne, P.; Loreau, M.; Mouquet, N.; David, P.
Titre Diversity spurs diversification in ecological communities Type Article scientifique
Année 2017 Publication Revue Abrégée Nat. Commun.
Volume 8 Numéro Pages (down) 15810
Mots-Clés adaptive radiations; biodiversity; colonization; competition; drive speciation; evolutionary emergence; limiting similarity; stability; sympatric speciation; trade-off
Résumé Diversity is a fundamental, yet threatened, property of ecological systems. The idea that diversity can itself favour diversification, in an autocatalytic process, is very appealing but remains controversial. Here, we study a generalized model of ecological communities and investigate how the level of initial diversity influences the possibility of evolutionary diversification. We show that even simple models of intra- and inter-specific ecological interactions can predict a positive effect of diversity on diversification: adaptive radiations may require a threshold number of species before kicking-off. We call this phenomenon DDAR (diversity-dependent adaptive radiations) and identify mathematically two distinct pathways connecting diversity to diversification, involving character displacement and the positive diversity-productivity relationship. Our results may explain observed delays in adaptive radiations at the macroscale and diversification patterns reported in experimental microbial communities, and shed new light on the dynamics of ecological diversity, the diversity-dependence of diversification rates, and the consequences of biodiversity loss.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue English Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 2041-1723 ISBN Médium
Région Expédition Conférence
Notes Approuvé pas de
Numéro d'Appel MARBEC @ alain.herve @ collection 2148
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Auteur Said, O.B.; Louati, H.; Soltani, A.; Preud’homme, H.; Cravo-Laureau, C.; Got, P.; Pringault, O.; Aissa, P.; Duran, R.
Titre Changes of benthic bacteria and meiofauna assemblages during bio-treatments of anthracene-contaminated sediments from Bizerta lagoon (Tunisia) Type Article scientifique
Année 2015 Publication Revue Abrégée Environ Sci Pollut Res
Volume 22 Numéro 20 Pages (down) 15319-15331
Mots-Clés Anthracene; Atmospheric Protection/Air Quality Control/Air Pollution; Bacteria diversity; Bioremediation; Bizerta lagoon; Community structure; Degradation; Ecotoxicology; Environmental Chemistry; Environmental Health; Environment, general; Meiofauna; Microcosms; PAH degraders; Waste Water Technology / Water Pollution Control / Water Management / Aquatic Pollution
Résumé Sediments from Bizerta lagoon were used in an experimental microcosm setup involving three scenarios for the bioremediation of anthracene-polluted sediments, namely bioaugmentation, biostimulation, and a combination of both bioaugmentation and biostimulation. In order to investigate the effect of the biotreatments on the benthic biosphere, 16S rRNA gene-based T-RFLP bacterial community structure and the abundance and diversity of the meiofauna were determined throughout the experiment period. Addition of fresh anthracene drastically reduced the benthic bacterial and meiofaunal abundances. The treatment combining biostimulation and bioaugmentation was most efficient in eliminating anthracene, resulting in a less toxic sedimentary environment, which restored meiofaunal abundance and diversity. Furthermore, canonical correspondence analysis showed that the biostimulation treatment promoted a bacterial community favorable to the development of nematodes while the treatment combining biostimulation and bioaugmentation resulted in a bacterial community that advantaged the development of the other meiofauna taxa (copepods, oligochaetes, polychaetes, and other) restoring thus the meiofaunal structure. The results highlight the importance to take into account the bacteria/meiofauna interactions during the implementation of bioremediation treatment.
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Editeur Lieu de Publication Éditeur
Langue en Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 0944-1344, 1614-7499 ISBN Médium
Région Expédition Conférence
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1415
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Auteur Durant, J.M.; Molinero, J.-C.; Ottersen, G.; Reygondeau, G.; Stige, L.C.; Langangen, O.
Titre Contrasting effects of rising temperatures on trophic interactions in marine ecosystems Type Article scientifique
Année 2019 Publication Revue Abrégée Sci Rep
Volume 9 Numéro Pages (down) 15213
Mots-Clés biodiversity; calanus-finmarchicus; climate-change; fluctuations; life-history; mallotus-villosus; match; mismatch; phenology; thermal tolerance
Résumé In high-latitude marine environments, primary producers and their consumers show seasonal peaks of abundance in response to annual light cycle, water column stability and nutrient availability. Predatory species have adapted to this pattern by synchronising life-history events such as reproduction with prey availability. However, changing temperatures may pose unprecedented challenges by decoupling the predator-prey interactions. Here we build a predator-prey model accounting for the full life-cycle of fish and zooplankton including their phenology. The model assumes that fish production is bottom-up controlled by zooplankton prey abundance and match or mismatch between predator and prey phenology, and is parameterised based on empirical findings of how climate influences phenology and prey abundance. With this model, we project possible climate-warming effects on match-mismatch dynamics in Arcto-boreal and temperate biomes. We find a strong dependence on synchrony with zooplankton prey in the Arcto-boreal fish population, pointing towards a possible pronounced population decline with warming because of frequent desynchronization with its zooplankton prey. In contrast, the temperate fish population appears better able to track changes in prey timing and hence avoid strong population decline. These results underline that climate change may enhance the risks of predator-prey seasonal asynchrony and fish population declines at higher latitudes.
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Auteur institutionnel Thèse
Editeur Lieu de Publication Éditeur
Langue English Langue du Résumé Titre Original
Éditeur de collection Titre de collection Titre de collection Abrégé
Volume de collection Numéro de collection Edition
ISSN 2045-2322 ISBN Médium
Région Expédition Conférence
Notes WOS:000491859500003 Approuvé pas de
Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2668
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