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Auteur Lagarde, F.; Fiandrino, A.; Ubertini, M.; d'Orbcastel, E.R.; Mortreux, S.; Chiantella, C.; Bec, B.; Bonnet, D.; Roques, C.; Bernard, I.; Richard, M.; Guyondet, T.; Pouvreau, S.; Lett, C. url  doi
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  Titre Duality of trophic supply and hydrodynamic connectivity drives spatial patterns of Pacific oyster recruitment Type Article scientifique
  Année 2019 Publication Revue Abrégée Marine Ecology Progress Series  
  Volume 632 Numéro Pages 81-100  
  Mots-Clés Coastal lagoon; Connectivity; Crassostrea gigas; Larval ecology; Oligotrophication; Recruitment; Settlement; Spatial patterns  
  Résumé The recent discovery of Pacific oyster Crassostrea gigas (also known as Magallana gigas) spatfields in a Mediterranean lagoon intensely exploited for shellfish farming (Thau lagoon) revealed significant contrasts in spatial patterns of recruitment. We evaluated the processes that drive spatial patterns in oyster recruitment by comparing observed recruitment, simulated hydrodynamic connectivity and ecological variables. We hypothesized that spatial variability of recruitment depends on (1) hydrodynamic connectivity and (2) the ecology of the larval supply, settlement, metamorphosis, survival and biotic environmental parameters. We assessed recruitment at 6-8 experimental sites by larval sampling and spat collection inside and outside oyster farming areas and on an east-west gradient, from 2012-2014. Hydrodynamic connectivity was simulated using a numerical 3D transport model assessed with a Eulerian indicator. The supply of large umbo larvae did not differ significantly inside and outside oyster farming areas, whereas the supply of pediveligers to sites outside shellfish farms was structured by hydrodynamic connectivity. Inside shellfish farming zones, unfavorable conditions due to trophic competition with filter-feeders jeopardized their settlement. In this case, our results suggest loss of settlement competence by oyster larvae. This confirms our hypothesis of top-down trophic control by the oysters inside farming zones of Thau lagoon in summer that fails to meet the ecological requirements of these areas as oyster nurseries. Knowledge of oyster dispersal, connectivity and recruitment in coastal lagoons will help local development of sustainable natural spat collection. On a global scale, our method could be transposed to other basins or used for other species such as mussels, clams or scallops, to better understand the spatial patterns of bivalve recruitment. Management of the oyster industry based on natural spat collection will help develop a sustainable activity, based on locally adapted oyster strains but also by reducing the risks of transferring pathogens between basins and the global carbon footprint of this industry.  
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  Langue en Langue du Résumé Titre Original  
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  Volume de collection Numéro de collection Edition  
  ISSN (up) 0171-8630, 1616-1599 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2673  
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Auteur MUTHS, D.; TESSIER, E.; BOURJEA, J. url  doi
openurl 
  Titre Genetic structure of the reef grouper Epinephelus merra in the West Indian Ocean appears congruent with biogeographic and oceanographic boundaries Type Article scientifique
  Année 2015 Publication Revue Abrégée Marine Ecology-an Evolutionary Perspective  
  Volume 36 Numéro 3 Pages 447-461  
  Mots-Clés Cytochrome b; marine connectivity; microsatellite; reef fish; West Indian Ocean  
  Résumé The reef fauna connectivity of the West Indian Ocean (WIO) is one of the least studied globally. Here we use genetic analyses of the grouper Epinephelus merra (Bloch 1793) to determine patterns of connectivity and to identify barriers to dispersal in this WIO marine area. Phylogeographic and population-level analyses were conducted on cytochrome b sequences and microsatellites (13 loci) from 557 individuals sampled in 15 localities distributed across the West Indian Ocean. Additional samples from the Pacific Ocean were used to benchmark the WIO population structure. The high level of divergence revealed between Indian and Pacific localities (of about 4.5% in sequences) might be the signature of the major tectonic and climatic changes operating at the Plio-Pleistocene transition, congruently with numerous examples of Indo-Pacific speciation. In comparison, the E. merra sequences from the Indian Ocean constitute a monophyletic clade with a low average genetic distance (d < 0.5%). However both genetic markers indicated some structure within this ocean. The main structure revealed was the isolation of the Maldives from the WIO localities (a different group signature identified by clustering analysis, great values of differentiation). Both marker types reveal further significant structure within the WIO, mainly the isolation of the Mascarene Islands (significant AMOVA and isolation-by-distance patterns) and some patchy structure between the northernmost localities and within the Mozambique Channel. The WIO genetic structure of E. merra appeared congruent with main biogeographic boundaries and oceanographic currents.  
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  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN (up) 0173-9565 ISBN Médium  
  Région Expédition Conférence  
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  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1436  
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Auteur Lett, C.; Barrier, N.; Bahlali, M. doi  openurl
  Titre Converging approaches for modeling the dispersal of propagules in air and sea Type Article scientifique
  Année 2020 Publication Revue Abrégée Ecol. Model.  
  Volume 415 Numéro Pages 108858  
  Mots-Clés Aerial dispersal; Aquatic dispersal; Atmospheric dispersal; Biophysical model; Eulerian model; Lagrangian model; larval dispersal; long-distance dispersal; Marine dispersal; Oceanic dispersal; particle trajectories; population connectivity; Propagule dispersal; reef fish; schooling behavior; seed dispersal; spatially explicit; terrestrial ecology; understanding recruitment; Wind dispersal  
  Résumé Terrestrial plants seeds, spores and pollen are often dispersed by wind. Likewise, most eggs and larvae of marine organisms are dispersed by oceanic currents. It was historically believed that the spatial scale at which dispersal occurs was orders of magnitude smaller for plants than for fish. However, recent empirical estimates of seed and larval dispersal suggest that these dispersal scales are more alike than previously thought. The modeling approaches used to simulate aerial and aquatic dispersal are also converging. Similar biophysical models are developed, in which outputs of Eulerian models simulating the main physical forcing mechanism (wind or currents) are used as inputs to Lagrangian models that include biological components (such as seed terminal velocity or larval vertical migration). These biophysical models are then used to simulate trajectories of the biological entities (seeds, larvae) in three dimensions. We reflect on these converging trends by first putting them into an historical perspective, and then by comparing the physical and biological processes represented in marine larva vs. terrestrial seed dispersal models, the data used for the models output corroboration, and the tools available to perform simulations. We conclude that this convergence offers the opportunity to bridge the gap between two scientific communities which are currently largely disconnected. More broadly, we also see our comparison across systems as a useful way to strengthen the links between aquatic and terrestrial ecology by sharing knowledge, methods, tools, and concepts.  
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  Langue English Langue du Résumé Titre Original  
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  Volume de collection Numéro de collection Edition  
  ISSN (up) 0304-3800 ISBN Médium  
  Région Expédition Conférence  
  Notes WOS:000501415400006 Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2706  
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Auteur Leroy, B.; Dias, M.S.; Giraud, E.; Hugueny, B.; Jezequel, C.; Leprieur, F.; Oberdorff, T.; Tedesco, P.A. doi  openurl
  Titre Global biogeographical regions of freshwater fish species Type Article scientifique
  Année 2019 Publication Revue Abrégée J. Biogeogr.  
  Volume Numéro Pages  
  Mots-Clés actinopterygians; biogeographical regions; biogeography; bioregionalization; bioregions; connectivity; dispersal; diversity; evolution; freshwater fish; history; homogenization; network; patterns; richness; transition zones; vicariance; world; zoogeographical regions  
  Résumé Aim To define the major biogeographical regions and transition zones for freshwater fish species. Taxon Strictly freshwater species of actinopterygian fish (i.e. excluding marine and amphidromous fish families). Methods We based our bioregionalization on a global database of freshwater fish species occurrences in drainage basins, which, after filtering, includes 11,295 species in 2,581 basins. On the basis of this dataset, we generated a bipartite (basin-species) network upon which we applied a hierarchical clustering algorithm (the Map Equation) to detect regions. We tested the robustness of regions with a sensitivity analysis. We identified transition zones between major regions with the participation coefficient, indicating the degree to which a basin has species from multiple regions. Results Our bioregionalization scheme showed two major supercontinental regions (Old World and New World, 50% species of the world and 99.96% endemics each). Nested within these two supercontinental regions lie six major regions (Nearctic, Neotropical, Palearctic, Ethiopian, Sino-Oriental and Australian) with extremely high degrees of endemism (above 96% except for the Palearctic). Transition zones between regions were of limited extent compared to other groups of organisms. We identified numerous subregions with high diversity and endemism in tropical areas (e.g. Neotropical), and a few large subregions with low diversity and endemism at high latitudes (e.g. Palearctic). Main conclusions Our results suggest that regions of freshwater fish species were shaped by events of vicariance and geodispersal which were similar to other groups, but with freshwater-specific processes of isolation that led to extremely high degrees of endemism (far exceeding endemism rates of other continental vertebrates), specific boundary locations and limited extents of transition zones. The identified bioregions and transition zones of freshwater fish species reflect the strong isolation of freshwater fish faunas for the past 10-20 million years. The extremely high endemism and diversity of freshwater fish fauna raises many questions about the biogeographical consequences of current introductions and extinctions.  
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  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN (up) 0305-0270 ISBN Médium  
  Région Expédition Conférence  
  Notes WOS:000484392300001 Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2637  
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Auteur Carpentier, A.S.; Berthe, C.; Ender, I.; Jaine, F.R.A.; Mourier, J.; Stevens, G.; De Rosemont, M.; Clua, E. doi  openurl
  Titre Preliminary insights into the population characteristics and distribution of reef (Mobula alfredi) and oceanic (M. birostris) manta rays in French Polynesia Type Article scientifique
  Année 2019 Publication Revue Abrégée Coral Reefs  
  Volume 38 Numéro 6 Pages 1197-1210  
  Mots-Clés aggregation; australia; bottle-nosed dolphins; california; Citizen science; conservation; Ecotourism management; habitat use; identification; marine park; movements; sharks; Site fidelity; Spatial connectivity; Sympatry  
  Résumé In French Polynesia, both currently recognized manta ray species, Mobula alfredi and M. birostris, are observed. Despite being an important cultural asset and generating significant economic benefits through manta ray watching tourism, published data on the ecology and threats to these species in the region are scarce. Based on an 18-year dataset of sighting records collected by citizen scientists and during two scientific expeditions, this study provides the first insights into the population characteristics and regional distribution of the two manta ray species in French Polynesia. A total of 1347 manta ray photographs (1337 for M. alfredi and 10 for M. birostris) were examined for the period January 2001-December 2017, with photo-identification techniques leading to the successful identification of 317 individual M. alfredi and 10 individual M. birostris throughout the Society, Tuamotu and Marquesas Islands. We provide the first confirmation of sympatric distribution of both species in the Society Islands. Our results highlight strong and long-term site fidelity of M. alfredi individuals to certain aggregation sites (> 9 years for 16 individuals) and reveal some degree of connectivity between populations, with 10 individuals recorded moving between islands located up to 50 km apart. Analysis of photographs of individuals bearing sub-lethal injuries (n = 68) suggests that M. alfredi are more likely to be injured at inhabited islands (Maupiti or Bora Bora; 75% of all injured individuals) than at uninhabited islands, with 75% of injuries related to boat propeller strikes and fishing gear entanglements. Our findings emphasize the need for further research to allow for a comprehensive evaluation of population structure, size and threats to manta rays in this region.  
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  ISSN (up) 0722-4028 ISBN Médium  
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  Notes WOS:000496024100010 Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 2658  
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