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Auteur Mazurais, D.; Covès, D.; Papandroulakis, N.; Ortega, A.; Desbruyeres, E.; Huelvan, C.; Le Gall, M.M.; de la Gándara, F.; Cahu, C.L.
Titre Gene expression pattern of digestive and antioxidant enzymes during the larval development of reared Atlantic bluefin tuna (ABFT), Thunnus thynnus L Type Article scientifique
Année 2015 Publication Revue Abrégée Aquac Res
Volume (down) 46 Numéro 10 Pages 2323-2331
Mots-Clés antioxidant; development; digestion; expression; gene; Tuna
Résumé The aim of this study was to determine whether mortality observed during the larval development of reared bluefin tuna (Thunnus thynnus) could be related to improper expression profiles of key genes involved in digestive or antioxidant response capabilities. Tuna larvae were sampled at hatching, 2, 5, 10, 15 and 20 dph (days post hatching) for the relative quantification of transcripts encoded by genes involved in digestive [trypsinogen 1 (TRYP1), alpha-amylase (AMY), aminopeptidase N (ANPEP)] and antioxidant [catalase (CAT)] functions. The levels of expression of ANPEP related to the development and maturation of intestinal function increased from 5 to 20 dph. Furthermore, AMY and TRYP1 genes, which are pancreatic enzymes implicated in carbohydrate and peptide digestions exhibit a typical peak of expression at 5 and 15 dph respectively. The antioxidant enzyme, CAT, exhibited higher mRNA levels during the first stage of larval development. In conclusion, our investigation indicates that the expression of genes involved in digestive and antioxidant physiological processes followed typical patterns which could not explain high mortality rate observed during the first stage of larval development.
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ISSN 1365-2109 ISBN Médium
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1455
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Auteur Dalongeville, A.; Andrello, M.; Mouillot, D.; Albouy, C.; Manel, S.
Titre Ecological traits shape genetic diversity patterns across the Mediterranean Sea: a quantitative review on fishes Type Article scientifique
Année 2016 Publication Revue Abrégée J. Biogeogr.
Volume (down) 43 Numéro 4 Pages 845-857
Mots-Clés atlantic bluefin tuna; bass dicentrarchus-labrax; climate-change; cod gadus-morhua; ecological traits; effective population-size; genetic diversity; gilthead sea; life-history traits; marine fishes; marine populations; Mediterranean Sea; microsatellite markers; microsatellites; mitochondrial; mitochondrial DNA; molecular markers; population genetics
Résumé AimWe set out to identify the determinants of the variation in genetic diversity among fish species and test whether multi-species genetic diversity is randomly distributed in space. LocationMediterranean Sea. MethodsWe collected genetic diversity data from 39 published studies on Mediterranean fishes (31 species) along with the spatial coordinates of the sampling sites. We focused on microsatellite heterozygosity (151 data points) and mitochondrial haplotype diversity (201 data points). We used linear regressions to link genetic diversity and 11 ecological traits. We also tested for spatial autocorrelation and trends in the residuals. ResultsAmong-species variation in microsatellite heterozygosity was explained by three ecological traits: vertical distribution, migration type and body length. Variation in mitochondrial haplotype diversity was also explained by vertical distribution and migration type, and by reproductive strategy (semelparity). However, vertical distribution and migration type showed opposite effects on microsatellites and mitochondrial diversity. After accounting for the effects of ecological traits, no spatial pattern was detected, except for one of the species considered. Main conclusionsEcological factors explain an important proportion of the among-species genetic diversity. These results suggest that life history strategies of the species influence the variation of microsatellite diversity indirectly through their effect on effective population size, while the spatial variations of genetic diversity seem to be too complex to be identified in our analysis. We found very different effects of traits on mitochondrial and nuclear DNA diversity, which can be explained by the specificities of mitochondrial DNA (absence of recombination, maternal inheritance and non-neutrality).
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ISSN 0305-0270 ISBN Médium
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Numéro d'Appel MARBEC @ alain.herve @ collection 1627
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Auteur Robinson, J.; Guillotreau, P.; Jimenez-Toribio, R.; Lantz, F.; Nadzon, L.; Dorizo, J.; Gerry, C.; Marsac, F.
Titre Impacts of climate variability on the tuna economy of Seychelles Type Article scientifique
Année 2010 Publication Revue Abrégée Climate Research
Volume (down) 43 Numéro Pages 149-162
Mots-Clés climate; economy; Enso; fisheries; Seychelles; tuna; variability
Résumé Many small island states have developed economies that are strongly dependent on tuna fisheries. Consequently, they are vulnerable to the socio-economic effects of climate change and variability, processes that are known to impact tuna fisheries distribution and productivity. The aim of this study was to assess the impacts of climate oscillations on the tuna-dependent economy of Seychelles. Using a multiplier approach, the direct, indirect and induced economic effects of the tuna industry expenditure benefiting the Seychelles' economy declined in 1998 by 58, 26 and 35%, respectively (mean decline: 42%), a year of strong climate oscillation in the western Indian Ocean. Multivariate patterns in tuna purse-seine vessel expenditures in port were substantially modified by strong climate oscillations, particularly in 1998. A cointegration time-series model predicted that a 40% decline in tuna landings and transhipment in Port Victoria, a value commensurate with that observed in 1998, would result in a 34% loss for the local economy solely through reductions in cargo handling expenditures. Of several indices tested, the Indian Oscillation Index was best at predicting the probability of switching between low and high regimes of landings and transhipment, which translate into impacts for the economy. It is hypothesised that a late 2006/early 2007 climate oscillation was compounded by prior overfishing to produce a stronger impact on the fishery and economy of Seychelles. The effects of fishing and climate variability on tuna fisheries are complex and pose significant challenges for fisheries management and the economic development of countries in the Indian Ocean.
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ISSN 0936-577x ISBN Médium
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Numéro d'Appel LL @ pixluser @ collection 101
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Auteur Dueri, S.; Guillotreau, P.; Jiménez-Toribio, R.; Oliveros-Ramos, R.; Bopp, L.; Maury, O.
Titre Food security or economic profitability? Projecting the effects of climate and socioeconomic changes on global skipjack tuna fisheries under three management strategies Type Article scientifique
Année 2016 Publication Revue Abrégée Global Environmental Change
Volume (down) 41 Numéro Pages 1-12
Mots-Clés Bioeconomic model; climate change; fishery management; Mey; Msy; Skipjack tuna
Résumé We investigate the interactions between anthropogenic climate change, socioeconomic developments and tuna fishery management strategies. For this purpose, we use the APECOSM-E model to map the effects of climate change and commercial fishing on the distribution of skipjack tuna biomass in the three oceans, combined with a new bioeconomic module representing the rent or profit of skipjack fisheries. For forcing, we use Representative Concentration Pathway (RCP) 8.5, the highest emission scenario for greenhouse gas concentrations presented in the IPCC’s Fifth Assessment Report (AR5), and the IPCC Socioeconomic Shared Pathway (SSP) 3, which is characterized by low economic development and a strong increase in the world population. We first investigate the impact of climate change on regional skipjack abundance, catches and profits in three oceans (Atlantic, Indian and Pacific) in 2010, 2050 and 2095. We then study the effects of three management strategies (maximum sustainable yield or MSY, maximum economic yield or MEY, and zero rent or ZR) on the future distribution of fishing fleets between oceans and on global economic rent. Our model projections for 2050 and 2095 show an increase in global skipjack biomass compared to 2010 and major changes in its distribution, impacting local and regional fishing efforts. The Pacific Ocean will continue to dominate the skipjack market. In our modeling of management strategies, the currently predominant MSY strategy would have been unprofitable in 2010, due to a decreased catch per unit effort (CPUE). In the future, however, technological developments should increase fishing efficiency and make MSY profitable. In all the scenarios, a MEY strategy is more profitable than MSY but leads to the lowest catches and the highest prices. This raises ethical questions in a world where food security may become a top priority. In the scenarios where MSY generates an economic loss (e.g. 2010), a ZR strategy allows global stocks to be exploited at high but still profitable levels. Conversely, in the scenarios where MSY is profitable, (e.g. 2095) ZR leads to overfishing and smaller global catches. We conclude that the most appropriate management strategy at any time is likely to change as environmental and socioeconomic conditions evolve. The decision to follow one or other strategy is a complex one that must be regularly reviewed and updated.
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ISSN 0959-3780 ISBN Médium
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Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1601
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Auteur Nikolic, N.; Lauretta, M.; Patucca, A.; Morandeau, G.
Titre Characterization and standardization of the Atlantic albacore French pelagic trawl fishery Type Article scientifique
Année 2018 Publication Revue Abrégée Aquat. Living Resour.
Volume (down) 31 Numéro Pages 31
Mots-Clés Albacore; Atlantic; behavior; catch; catch rates; fisheries; habitat; migration; north pacific albacore; ocean; stock; thunnus-alalunga; trawl; tuna
Résumé We compiled and analysed logbook data from the French trawl albacore fishery covering the period 1991-2015. The dataset comprised catch and effort data for the French fleet operating in the Bay of Biscay and Celtic Sea, as well as spatiotemporal and gear characteristics. Generalized linear modelling was used to model spatial, seasonal, environmental, and gear covariates of fleet CPUE rates. A long-term index of relative abundance is provided that can be integrated into the stock assessment of North Atlantic albacore. The analysis revealed higher albacore CPUE associated with relatively low sea surface temperature and distinct seasonal effects. The derived abundance trend for the French trawl fishery agreed with the estimated time series of stock abundance from recent assessments.
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ISSN 0990-7440 ISBN Médium
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Numéro d'Appel MARBEC @ alain.herve @ collection 2426
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