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Auteur Walker, E.; Bez, N. url  doi
openurl 
  Titre (up) A pioneer validation of a state-space model of vessel trajectories (VMS) with observers' data Type Article scientifique
  Année 2010 Publication Revue Abrégée Ecological Modelling  
  Volume 221 Numéro Pages 2008-2017  
  Mots-Clés Bayes; data; Markov; model; Monitoring; Observers'; purse-seiners; state-space; Systems; Trajectory; Tropical; tuna; Validation; Vessel; (Vms)  
  Résumé In the context of the expansion of animal tracking and bio-logging, state-space models have been developed with the objective to characterise animals' trajectories and to understand the factors controlling their behaviour. In the fisheries community, the electronic tagging of vessels commonly designated by Vessel Monitoring Systems (VMS) is developing and provides a new insight for the understanding, the analysis and the modelling of the trajectories of vessels and their prospecting behaviour. VMS data are thus a clue for the proper definition of fishing effort which remains a fundamental parameter of tuna stock assessments. In this context, we used the VMS (recording of hourly positions) of the French tropical tuna purse-seiners operating in the Indian Ocean to characterise three types of movement (states) on the VMS trajectories (stillness, tracking, and cruising). Based on empirical evidences, and on the regular frequency of VMS acquisition, this was achieved by the development of a Bayesian Hidden Markov model for the speeds and turning angles derived from the hourly steps of the trajectories. In a second phase, states were related to activities disentangling stillness into fishing or stop at sea. Finally the quality of the model performances was rigorously quantified thanks to observers' data. Confronting model prediction and true activities allowed estimating that 10% of the hourly steps were misclassified. The assumptions and model' choices are discussed, highlighting the fact that VMS data and observers' data having different time resolutions, the effective use of validating data was troublesome. However, without validation, these analyses remain speculative. The validation part of this work represents an important step for the operational use of state-space models in ecology in the broad sense (predators' tracking data, e.g. birds or mammals trajectories).  
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  Langue Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0304-3800 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel LL @ pixluser @ collection 112  
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Auteur Zudaire, I.; Murua, H.; Grande, M.; Pernet, F.; Bodin, N. url  doi
openurl 
  Titre (up) Accumulation and mobilization of lipids in relation to reproduction of yellowfin tuna (Thunnus albacares) in the Western Indian Ocean Type Article scientifique
  Année 2014 Publication Revue Abrégée Fisheries Research  
  Volume Numéro Pages 50-59  
  Mots-Clés FADs; Fecundity; Income-capital breeder; Lipid class composition; Reproductive allocation strategy; Tropical tuna  
  Résumé Total lipid content and lipid class composition were analyzed in gonads, liver and white muscle of yellowfin tuna (Thunnus albacares) throughout ovary development to understand its reproductive allocation strategy and to assess the relation between female condition and reproduction. A total of 112 females were collected onboard purse-seiner in the Western Indian Ocean from January to March 2009, from June to July 2009, and from April to May 2010. Gonads were characterized by highly variable total lipid contents ranging from 5 to 27 μg mg−1 of wet weight (ww) with a predominance of neutral lipids, mainly triacylglycerols (TAG) and sterol- and wax-esters. The different lipid classes in gonads described an accumulative pattern through the maturity process from immature to hydration phase. Total lipid content in liver varied from 10 to 21 μg mg−1 ww, and serves as fuel for yellowfin tuna reproduction. TAG and phospholipid deposits became depleted as the ovary developed, suggesting a transfer of lipids directly from liver to the oocytes during vitellogenesis. In contrast, muscle total lipid content was low and constant throughout ovarian development (2.5–6 μg mg−1 ww). Hence, yellowfin tuna can be defined as an income-capital breeder species for which the cost of reproduction depends mainly on concurrent energy income from feeding and only little on stored lipids. Besides, no significant relationship between gonad lipid composition and fecundity was found in females able to spawn. Finally, the influence of yellowfin tuna aggregation behaviour on reproductive female condition has been investigated: gonad total lipid contents were higher in females caught in free-swimming schools than in females caught under fish aggregating devices (FADs). However, these results did not clarify whether the influence of FADs on associated yellowfin tuna affects their reproductive capacity.  
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  Editeur Lieu de Publication Éditeur  
  Langue Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Advances in Fisheries Research in Ibero-America Titre de collection Abrégé  
  Volume de collection 160 Numéro de collection Edition  
  ISSN 0165-7836 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 1209  
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Auteur Torres-Irineo, E.; Dreyfus-Leon, M.; Gaertner, D.; Salas, S.; Marchal, P. doi  openurl
  Titre (up) Adaptive responses of tropical tuna purse-seiners under temporal regulations Type Article scientifique
  Année 2017 Publication Revue Abrégée Ambio  
  Volume 46 Numéro 1 Pages 88-97  
  Mots-Clés atlantic; behavior; Closed season; eastern pacific-ocean; eastern tropical pacific; Fisher behaviour; Fisheries management; fishing strategies; fleet dynamics; mixed fisheries; model; Purse-seine fishing; state; trawlers; Tropical tuna  
  Résumé The failure to achieve fisheries management objectives has been broadly discussed in international meetings. Measuring the effects of fishery regulations is difficult due to the lack of detailed information. The yellowfin tuna fishery in the eastern Pacific Ocean offers an opportunity to evaluate the fishers' responses to temporal regulations. We used data from observers on-board Mexican purse-seine fleet, which is the main fleet fishing on dolphin-associated tuna schools. In 2002, the Inter-American Tropical Tuna Commission implemented a closed season to reduce fishing effort for this fishery. For the period 1992-2008, we analysed three fishery indicators using generalized estimating equations to evaluate the fishers' response to the closure. We found that purse-seiners decreased their time spent in port, increased their fishing sets, and maintained their proportion of successful fishing sets. Our results highlight the relevance of accounting for the fisher behaviour to understand fisheries dynamics when establishing management regulations.  
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  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 0044-7447 ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ collection 2072  
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Auteur Fonteneau, A.; Pereira, J.G. url  doi
openurl 
  Titre (up) Analysis of the Daily Catch and Effort Data of the Bluefin (Thunnus Thynnus) Algarve Trap Fishery During the Years 1898–1900 Type Article scientifique
  Année 2012 Publication Revue Abrégée Aquatic Living Resources  
  Volume FirstView Numéro Pages  
  Mots-Clés Bluefin tuna; Daily catches; East Atlantic; Fish behaviour; Fish trap; Historical survey; Portugal; Spawning migration pattern  
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  Editeur Lieu de Publication Éditeur  
  Langue Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel LL @ pixluser @ collection 187  
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Auteur Sardenne, F.; Chassot, E.; Fouche, E.; Menard, F.; Lucas, V.; Bodin, N. doi  openurl
  Titre (up) Are condition factors powerful proxies of energy content in wild tropical tunas? Type Article scientifique
  Année 2016 Publication Revue Abrégée Ecol. Indic.  
  Volume 71 Numéro Pages 467-476  
  Mots-Clés body condition; cod gadus-morhua; condition indexes; ecosystem; Energy variability; fish; Fish health; katsuwonus-pelamis; Large pelagic species; Proximate composition; thunnus-albacares; western indian-ocean; Yellowfin tuna  
  Résumé The “condition” is used as an indicator of fish health and is generally equated with the quantity of energy reserves. Biometric condition factors have been widely used and preferred over costly and time-consuming biochemical condition. Here, we investigated the relevance of four common condition factors based on biometric measurements (Le Cren's index, girth -length index, gonado-somatic index and hepato-somatic index) and of size- and weight -based empirical models to describe the physiological condition of tropical tunas. Biometric condition factors of bigeye (Thunnus obesus), skipjack (Katsuwonus pelamis) and yellowfin (Thunnus albacares) tunas sampled throughout 2013 in the western Indian Ocean region were assessed against benchmark biochemical indices (lipid content, protein content, triacylglycerol:sterol ratio and energy density) estimated in tissues with different physiological functions, i.e. red muscle, white muscle, liver, and gonads. Our findings suggest that tropical tunas do not store lipids in white muscle and that protein content is less variable than lipid content, which largely varies with ontogeny and the seasons according to tissue and species. This variability induced inconsistency between biometric factors, including the empirically adjusted ones, and biochemical indices, with the exception of the gonado-somatic index that fitted well to the composition of the gonads in the three species, and especially in females. (C) 2016 Elsevier Ltd. All rights reserved.  
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  Langue English Langue du Résumé Titre Original  
  Éditeur de collection Titre de collection Titre de collection Abrégé  
  Volume de collection Numéro de collection Edition  
  ISSN 1470-160x ISBN Médium  
  Région Expédition Conférence  
  Notes Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ collection 1697  
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