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Auteur Canard, E.F.; Mouquet, N.; Mouillot, D.; Stanko, M.; Miklisova, D.; Gravel, D. url  doi
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  Titre Empirical Evaluation of Neutral Interactions in Host-Parasite Networks Type Article scientifique
  Année 2014 Publication Revue Abrégée American Naturalist  
  Volume 183 Numéro 4 Pages 468-479  
  Mots-Clés abundance; animal mutualistic networks; community; dissimilarity; effort; food-web structure; geographical variation; host-parasite network; network structure; neutrality; null model; phylogenetic signal; reconciling niche; sampling; scale-dependence; species abundance distribution  
  Résumé While niche-based processes have been invoked extensively to explain the structure of interaction networks, recent studies propose that neutrality could also be of great importance. Under the neutral hypothesis, network structure would simply emerge from random encounters between individuals and thus would be directly linked to species abundance. We investigated the impact of species abundance distributions on qualitative and quantitative metrics of 113 host-parasite networks. We analyzed the concordance between neutral expectations and empirical observations at interaction, species, and network levels. We found that species abundance accurately predicts network metrics at all levels. Despite host-parasite systems being constrained by physiology and immunology, our results suggest that neutrality could also explain, at least partially, their structure. We hypothesize that trait matching would determine potential interactions between species, while abundance would determine their realization.  
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  ISSN (up) 0003-0147 ISBN Médium  
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  Numéro d'Appel MARBEC @ isabelle.vidal-ayouba @ collection 573  
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Auteur van Gils, J.A.; van der Geest, M.; De Meulenaer, B.; Gillis, H.; Piersma, T.; Folmer, E.O. url  doi
openurl 
  Titre Moving on with foraging theory: incorporating movement decisions into the functional response of a gregarious shorebird Type Article scientifique
  Année 2015 Publication Revue Abrégée Journal of Animal Ecology  
  Volume 84 Numéro Pages 554-564  
  Mots-Clés competition continuous-time Markov chain cryptic interference diet distribution habitat choice intake rate movement ecology predation toxic prey SPATIAL-DISTRIBUTION RED KNOTS MODELING INTERFERENCE CRYPTIC INTERFERENCE STOCHASTIC VERSION BEHAVIORAL ECOLOGY MULTISTATE MODELS BANC-DARGUIN GROUP-SIZE PREY Ecology Zoology  
  Résumé 1. Models relating intake rate to food abundance and competitor density (generalized functional response models) can predict forager distributions and movements between patches, but we lack understanding of how distributions and small-scale movements by the foragers themselves affect intake rates. Using a state-of-the-art approach based on continuous-time Markov chain dynamics, we add realism to classic functional response models by acknowledging that the chances to encounter food and competitors are influenced by movement decisions, and, vice versa, that movement decisions are influenced by these encounters. We used a multi-state modelling framework to construct a stochastic functional response model in which foragers alternate between three behavioural states: searching, handling and moving. Using behavioural observations on a molluscivore migrant shorebird (red knot, Calidris canutus canutus), at its main wintering area (Banc d'Arguin, Mauritania), we estimated transition rates between foraging states as a function of conspecific densities and densities of the two main bivalve prey. Intake rate decreased with conspecific density. This interference effect was not due to decreased searching efficiency, but resulted from time lost to avoidance movements. Red knots showed a strong functional response to one prey (Dosinia isocardia), but a weak response to the other prey (Loripes lucinalis). This corroborates predictions from a recently developed optimal diet model that accounts for the mildly toxic effects due to consuming Loripes. Using model averaging across the most plausible multi-state models, the fully parameterized functional response model was then used to predict intake rate for an independent data set on habitat choice by red knot. Comparison of the sites selected by red knots with random sampling sites showed that the birds fed at sites with higher than average Loripes and Dosinia densities, that is sites for which we predicted higher than average intake rates. We discuss the limitations of Holling's classic functional response model which ignores movement and the limitations of contemporary movement ecological theory that ignores consumer-resource interactions. With the rapid advancement of technologies to track movements of individual foragers at fine spatial scales, the time is ripe to integrate descriptive tracking studies with stochastic movement-based functional response models.  
  Adresse [van Gils, Jan A.; van der Geest, Matthijs; De Meulenaer, Brecht; Gillis, Hanneke; Piersma, Theunis; Folmer, Eelke O.] NIOZ Royal Netherlands Inst Sea Res, Dept Marine Ecol, NL-1790 AB Den Burg, Texel, Netherlands. [van der Geest, Matthijs; Piersma, Theunis] Univ Groningen, Anim Ecol Grp, Ctr Ecol & Evolutionary Studies CEES, Chair Global Flyway Ecol, NL-9700 CC Groningen, Netherlands. van Gils, JA (reprint author), NIOZ Royal Netherlands Inst Sea Res, Dept Marine Ecol, POB 59, NL-1790 AB Den Burg, Texel, Netherlands. Jan.van.Gils@nioz.nl  
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  ISSN (up) 0021-8790 ISBN Médium  
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  Notes ISI Document Delivery No.: CB9RB Times Cited: 0 Cited Reference Count: 61 van Gils, Jan A. van der Geest, Matthijs De Meulenaer, Brecht Gillis, Hanneke Piersma, Theunis Folmer, Eelke O. NWO WOTRO [W.01.65.221.00]; NWO [R 84-639]; NWO VIDI [864.09.002] We thank Parc National du Banc d'Arguin (PNBA) for their hospitality, the hosting of our presence and the permission to work in and from the Iwik scientific station. Lemhaba ould Yarba made the logistic arrangements. Joop van Eerbeek, Erik J. Jansen, Han Olff and El-Hacen Mohamed El-Hacen helped collecting and sorting benthos samples. Valuable comments on the manuscript were given by Allert Bijleveld, Jaap van der Meer, Ola Olsson, Thomas Oudman, Isabel M. Smallegange, an anonymous referee and by the 'literature club' of the Centre for Integrative Ecology during JAvG's sabbatical at Deakin University. Dick Visser polished the figures. This work is supported by an NWO WOTRO Integrated Programme grant (W.01.65.221.00) to TP, an NWO travel grant (R 84-639) to EOF, and an NWO VIDI grant (864.09.002) to JAvG. 0 WILEY-BLACKWELL HOBOKEN J ANIM ECOL Approuvé pas de  
  Numéro d'Appel MARBEC @ alain.herve @ 1412 collection 1383  
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Auteur Rivera-Ingraham, G.A.; Barri, K.; Boel, M.; Farcy, E.; Charles, A.-L.; Geny, B.; Lignot, J.-H. doi  openurl
  Titre Osmoregulation and salinity-induced oxidative stress: is oxidative adaptation determined by gill function? Type Article scientifique
  Année 2016 Publication Revue Abrégée J. Exp. Biol.  
  Volume 219 Numéro 1 Pages 80-89  
  Mots-Clés Antioxidant defense; antioxidant enzymes; blue-crab; callinectes-sapidus; Carcinus aestuarii; crab carcinus-maenas; green crab; na+/k+-atpase activity; Osmoregulation; progressive hypoxia; reactive oxygen; ROS production; shore crab; temporal distribution  
  Résumé Osmoregulating decapods such as the Mediterranean green crab Carcinus aestuarii possess two groups of spatially segregated gills: anterior gills serve mainly respiratory purposes, while posterior gills contain osmoregulatory structures. The co-existence of similar tissues serving different functions allows the study of differential adaptation, in terms of free radical metabolism, upon salinity change. Crabs were immersed for 2 weeks in seawater (SW, 37 ppt), diluted SW (dSW, 10 ppt) and concentrated SW (cSW, 45 ppt). Exposure to dSW was the most challenging condition, elevating respiration rates of whole animals and free radical formation in hemolymph (assessed fluorometrically using C-H(2)DFFDA). Further analyses considered anterior and posterior gills separately, and the results showed that posterior gills are the main tissues fueling osmoregulatory-related processes because their respiration rates in dSW were 3.2-fold higher than those of anterior gills, and this was accompanied by an increase in mitochondrial density (citrate synthase activity) and increased levels of reactive oxygen species (ROS) formation (1.4-fold greater, measured through electron paramagnetic resonance). Paradoxically, these posterior gills showed undisturbed caspase 3/7 activity, used here as a marker for apoptosis. This may only be due to the high antioxidant protection that posterior gills benefit from [superoxide dismutase (SOD) in posterior gills was over 6 times higher than in anterior gills]. In conclusion, osmoregulating posterior gills are better adapted to dSW exposure than respiratory anterior gills because they are capable of controlling the deleterious effects of the ROS production resulting from this salinity-induced stress.  
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  ISSN (up) 0022-0949 ISBN Médium  
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  Numéro d'Appel MARBEC @ alain.herve @ collection 1541  
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Auteur Putman, N.F.; Verley, P.; Shay, T.J.; Lohmann, K.J. url  doi
openurl 
  Titre Simulating transoceanic migrations of young loggerhead sea turtles : merging magnetic navigation behavior with an ocean circulation model Type Article scientifique
  Année 2012 Publication Revue Abrégée Journal of Experimental Biology  
  Volume 215 Numéro 11 Pages 1863-1870  
  Mots-Clés dispersal; Distribution; loggerhead sea turtle; magnetic map; magnetorecpetion; ocean circulation model  
  Résumé Young loggerhead sea turtles (Caretta caretta) from eastern Florida, USA, undertake a transoceanic migration in which they gradually circle the Sargasso Sea before returning to the North American coast. Loggerheads possess a. magnetic map' in which regional magnetic fields elicit changes in swimming direction along the migratory pathway. In some geographic areas, however, ocean currents move more rapidly than young turtles can swim. Thus, the degree to which turtles can control their migratory movements has remained unclear. In this study, the movements of young turtles were simulated within a high-resolution ocean circulation model using several different behavioral scenarios, including one in which turtles drifted passively and others in which turtles swam briefly in accordance with experimentally derived data on magnetic navigation. Results revealed that small amounts of oriented swimming in response to regional magnetic fields profoundly affected migratory routes and endpoints. Turtles that engaged in directed swimming for as little as 1-3 h per day were 43-187% more likely than passive drifters to reach the Azores, a productive foraging area frequented by Florida loggerheads. They were also more likely to remain within warm-water currents favorable for growth and survival, avoid areas on the perimeter of the migratory route where predation risk and thermal conditions pose threats, and successfully return to the open-sea migratory route if carried into coastal areas. These findings imply that even weakly swimming marine animals may be able to exert strong effects on their migratory trajectories and open-sea distributions through simple navigation responses and minimal swimming.  
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  ISSN (up) 0022-0949 ISBN Médium  
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  Numéro d'Appel LL @ pixluser @ collection 215  
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Auteur Ben Othman, H.; Pringault, O.; Louati, H.; Hlaili, A.S.; Leboulanger, C. doi  openurl
  Titre Impact of contaminated sediment elutriate on coastal phytoplankton community (Thau lagoon, Mediterranean Sea, France) Type Article scientifique
  Année 2017 Publication Revue Abrégée J. Exp. Mar. Biol. Ecol.  
  Volume 486 Numéro Pages 1-12  
  Mots-Clés Contaminants; domoic acid production; estuarine sediments; fresh-water; marine; Mediterranean lagoon; Metals; microbial carbon; nutrient enrichment; nutrients; Phytoplankton community; polycyclic aromatic-hydrocarbons; pseudo-nitzschia; sediment resuspension; temporal distribution  
  Résumé Effects of sediment-released contaminants and nitrogen were assessed on phytoplankton communities sampled from Thau lagoon (France, Mediterranean Sea) and one close offshore marine station. Phytoplankton was exposed to sediment elutriate (seawater containing a mix of metals, organic chemicals, and nutrients) or to ammonium enrichment for four days using immersed microcosms exposed to natural conditions of light and temperature. Functional (production – respiration balance) and structural (taxonomy and cell densities) responses of the phytoplankton community were assessed. In the lagoon, both treatments stimulated phytoplankton growth, compare to controls. Conversely in the offshore station, the phytoplankton growth was stimulated only with the sediment elutriate addition. In offshore and lagoon stations, both treatments caused a shift in the taxonomic composition of the phytoplankton. Proliferation of potentially toxic diatoms and dinoflagellates resulted from the addition of elutriate. Correspondence analysis determined that phytoplankton from the offshore station was more sensitive to both treatments compared to the lagoon community. According to daily production and respiration balance, lagoon community metabolism remained heterotrophic (P < R) for all treatments, whereas only transient shifts to net autotrophy (P> R) were observed in the offshore community. Direct toxicity of contaminants released from sediment, if any, was therefore masked by nutrient enrichment effects, whereas indirect evidence of contaminant pressure was highlighted by changes in community composition and metabolism. (C) 2016 Elsevier B.V. All rights reserved.  
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  Numéro d'Appel MARBEC @ alain.herve @ collection 1715  
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